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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
not	xenopus		involuted dorsal mesoderm [+] Eberth-Kastschenko layer,abdominal myoblast,anterior notochord,archenteron roof midline,axial ossicle,caudal presomitic mesoderm,cranial skeleton,dermatome,dermomyotome,dorsal endoderm,dorsomedial edge of myotome,flexural organ,left-right organizer,left-right organizer primordium,mandibular mesenchyme,monociliated cell,myocoelic slit,myotome,notochordal sheath,perichordal tissue,postcranial axial skeleton,posterior notochord,prechordal plate,presomitic mesoderm,rib,rostral presomitic mesoderm,sclerotomal cartilage,sclerotomal mesenchyme,sclerotome,stratum compactum,stratum spongiosum,syndetome,transverse process,urostyle,vacuolated notochordal tissue,ventrolateral edge of myotome,vertebra,vertebral centrum,vertebral column,vertebral element,axial mesoderm,axial skeleton,cervical vertebra,dermatome,dermis,elastica externa,flexural organ,gastrocoel roof plate,head somite 1,head somite 2,head somite 3,head somite 4,myotome of head somite 1,myotome of head somite 2,myotome of head somite 3,myotome of head somite 4,myotome of tail somite 14,myotome of tail somite 15,myotome of tail somite 16,myotome of tail somite 17,myotome of tail somite 18,myotome of trunk somite 1,myotome of trunk somite 10,myotome of trunk somite 11,myotome of trunk somite 12,myotome of trunk somite 13,myotome of trunk somite 2,myotome of trunk somite 3,myotome of trunk somite 4,myotome of trunk somite 5,myotome of trunk somite 6,myotome of trunk somite 7,myotome of trunk somite 8,myotome of trunk somite 9,notochord,notochordal epithelium,paraxial mesoderm,presomitic mesoderm,presumptive axial mesoderm,presumptive paraxial mesoderm,sacral vertebra,sclerotome of head somite 4,sclerotome of tail somite 14,sclerotome of tail somite 15,sclerotome of tail somite 16,sclerotome of tail somite 17,sclerotome of tail somite 18,sclerotome of trunk somite 1,sclerotome of trunk somite 10,sclerotome of trunk somite 11,sclerotome of trunk somite 12,sclerotome of trunk somite 13,sclerotome of trunk somite 2,sclerotome of trunk somite 3,sclerotome of trunk somite 4,sclerotome of trunk somite 5,sclerotome of trunk somite 6,sclerotome of trunk somite 7,sclerotome of trunk somite 8,sclerotome of trunk somite 9,somite,tail somite 14,tail somite 15,tail somite 16,tail somite 17,tail somite 18,trunk somite 1,trunk somite 10,trunk somite 11,trunk somite 12,trunk somite 13,trunk somite 2,trunk somite 3,trunk somite 4,trunk somite 5,trunk somite 6,trunk somite 7,trunk somite 8,trunk somite 9,urostyle

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Expression summary for not

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Experiment	Species	Images	Stages	Anatomy	Assay
Khokha MK et al. (2005) Assay Paper	tropicalis	1 image	NF stage 14 to NF stage 15	notochord	in situ hybridization
Kodjabachian L and Lemaire P (2001) Assay Paper	laevis	1 image	NF stage 11	axial mesoderm, involuted dorsal mesoderm, presumptive paraxial mesoderm	in situ hybridization
Leise WF and Mueller PR (2004) Assay Paper	xenopus	1 image	NF stage 13 to NF stage 18	axial mesoderm, notochord	in situ hybridization
Yasuo H and Lemaire P (2001) Assay Paper	xenopus	2 images	NF stage 11 to NF stage 13	axial mesoderm, involuted dorsal mesoderm, notochord	in situ hybridization
Yasuo H and Lemaire P (2001) Assay Paper	laevis	1 image	NF stage 11 to NF stage 13	notochord	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	3 images	NF stage 18 to NF stage 37 and 38	axial mesoderm, notochord	in situ hybridization
Role of frizzled 7 in the regulation of convergent extension movements during gastrulation in Xenopus laevis. Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
Xenopus p21-activated kinase 5 regulates blastomeres'' adhesive properties during convergent extension movements. Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning. Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization
Xenopus SMOC-1 Inhibits bone morphogenetic protein signaling downstream of receptor binding and is essential for postgastrula... Paper	laevis	1 image	NF stage 11	axial mesoderm	in situ hybridization
Fujimi TJ et al. (2012) Assay Paper	laevis	2 images	NF stage 10.5 to NF stage 14	axial mesoderm, notochord	in situ hybridization
Activin redux: specification of mesodermal pattern in Xenopus by graded concentrations of endogenous activin B. Paper	laevis	1 image	NF stage 18	notochord	in situ hybridization
The XenopusTGFBI is required for embryogenesis throughregulation of canonical Wnt signalling. Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
The KH domain protein encoded by quaking functions as a dimer and is essential for notochord development in Xenopus embryos. Paper	laevis	1 image	NF stage 13	axial mesoderm	in situ hybridization
TGF-beta signaling-mediated morphogenesis: modulation of cell adhesion via cadherin endocytosis. Paper	laevis	1 image	NF stage 12.5	axial mesoderm	in situ hybridization
Xenopus Cdc42 regulates convergent extension movements during gastrulation through Wnt/Ca2+ signaling pathway. Paper	laevis	1 image	NF stage 29 and 30	notochord	in situ hybridization
Xenopus Cdc42 regulates convergent extension movements during gastrulation through Wnt/Ca2+ signaling pathway. Paper	laevis	1 image	NF stage 29 and 30	notochord	in situ hybridization
Tail formation as a continuation of gastrulation: the multiple cell populations of the Xenopus tailbud derive from the late ... Paper	laevis	1 image	NF stage 12 to NF stage 31	axial mesoderm, notochord	in situ hybridization
Tail formation as a continuation of gastrulation: the multiple cell populations of the Xenopus tailbud derive from the late ... Paper	laevis	1 image	NF stage 11	axial mesoderm	in situ hybridization
Tail formation as a continuation of gastrulation: the multiple cell populations of the Xenopus tailbud derive from the late ... Paper	laevis	1 image	NF stage 23 to NF stage 31	notochord	in situ hybridization
Tail formation as a continuation of gastrulation: the multiple cell populations of the Xenopus tailbud derive from the late ... Paper	laevis	1 image	NF stage 23	notochord	in situ hybridization
Yes-associated protein 65 (YAP) expands neural progenitors and regulates Pax3 expression in the neural plate border zone. Paper	laevis	1 image	NF stage 13	axial mesoderm	in situ hybridization
Analysis of the developing Xenopus tail bud reveals separate phases of gene expression during determination and outgrowth. Paper	laevis	1 image	NF stage 14	axial mesoderm, notochord	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	1 image	NF stage 14	axial mesoderm, notochord	in situ hybridization
Xenopus hairy2b specifies anterior prechordal mesoderm identity within Spemann''s organizer. Paper	laevis	1 image	NF stage 10.25	involuted dorsal mesoderm	in situ hybridization
Xenopus hairy2b specifies anterior prechordal mesoderm identity within Spemann''s organizer. Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
Overexpression of camello, a member of a novel protein family, reduces blastomere adhesion and inhibits gastrulation in Xeno... Paper	laevis	1 image	NF stage 16	axial mesoderm	in situ hybridization
A Conserved Oct4/POUV-Dependent Network Links Adhesion and Migration to Progenitor Maintenance. Paper	laevis	1 image	NF stage 12	involuted dorsal mesoderm, presumptive axial mesoderm	in situ hybridization
A Conserved Oct4/POUV-Dependent Network Links Adhesion and Migration to Progenitor Maintenance. Paper	laevis	1 image	NF stage 12	involuted dorsal mesoderm, presumptive axial mesoderm	in situ hybridization
Directional migration of leading-edge mesoderm generates physical forces: Implication in Xenopus notochord formation during ... Paper	laevis	1 image	NF stage 12.5	axial mesoderm	in situ hybridization
Directional migration of leading-edge mesoderm generates physical forces: Implication in Xenopus notochord formation during ... Paper	laevis	1 image	NF stage 12.5	axial mesoderm	in situ hybridization
Xantivin suppresses the activity of EGF-CFC genes to regulate nodal signaling. Paper	laevis	1 image	NF stage 10.25	involuted dorsal mesoderm, presumptive axial mesoderm	in situ hybridization
Wnt/Frizzled signaling requires dPRR, the Drosophila homolog of the prorenin receptor. Paper	tropicalis	1 image	NF stage 12	presumptive axial mesoderm	in situ hybridization
Kam RK et al. (2013) Assay Paper	laevis	1 image	NF stage 13	axial mesoderm	in situ hybridization
The Spemann organizer of Xenopus is patterned along its anteroposterior axis at the earliest gastrula stage. Paper	laevis	1 image	NF stage 10	involuted dorsal mesoderm	in situ hybridization
Khadka D et al. (2006) Assay Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
Regulation of BMP signaling by the BMP1/TLD-related metalloprotease, SpAN. Paper	laevis	1 image	NF stage 12	involuted dorsal mesoderm, presumptive axial mesoderm	in situ hybridization
Integrin-ECM interactions regulate cadherin-dependent cell adhesion and are required for convergent extension in Xenopus. Paper	laevis	1 image	NF stage 12	presumptive axial mesoderm	in situ hybridization
Louie SH et al. (2009) Assay Paper	laevis	1 image	NF stage 11 to NF stage 14	notochord	in situ hybridization
Peyrot SM et al. (2011) Assay Paper	laevis	1 image	NF stage 10.5 to NF stage 14	axial mesoderm, notochord, presumptive axial mesoderm	in situ hybridization
Essential role of AWP1 in neural crest specification in Xenopus. Paper	laevis	1 image	NF stage 14	notochord	in situ hybridization
Calcium signaling during convergent extension in Xenopus. Paper	laevis	1 image	NF stage 12	presumptive axial mesoderm	in situ hybridization
Kim GH et al. (2013) Assay Paper	laevis	1 image	NF stage 11 to NF stage 14	presumptive axial mesoderm	in situ hybridization
PLD1 regulates Xenopus convergent extension movements by mediating Frizzled7 endocytosis for Wnt/PCP signal activation. Paper	laevis	1 image	NF stage 11.5 to NF stage 12	presumptive axial mesoderm	in situ hybridization
Janesick A et al. (2017) Assay Paper	laevis	1 image	NF stage 16	notochord	in situ hybridization
Transcriptomics of Dorso-Ventral Axis Determination in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 11	presumptive axial mesoderm	in situ hybridization
Frzb modulates Wnt-9a-mediated beta-catenin signaling during avian atrioventricular cardiac cushion development. Paper	laevis	1 image	NF stage 11	presumptive axial mesoderm	in situ hybridization
TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis. Paper	laevis	1 image	NF stage 12	axial mesoderm	in situ hybridization
Rab7 is required for mesoderm patterning and gastrulation in Xenopus. Paper	laevis	1 image	NF stage 13	notochord	in situ hybridization

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