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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
hoxd1	xenopus		involuted dorsal mesoderm [+] Eberth-Kastschenko layer,abdominal myoblast,anterior notochord,archenteron roof midline,axial ossicle,caudal presomitic mesoderm,cranial skeleton,dermatome,dermomyotome,dorsal endoderm,dorsomedial edge of myotome,flexural organ,left-right organizer,left-right organizer primordium,mandibular mesenchyme,monociliated cell,myocoelic slit,myotome,notochordal sheath,perichordal tissue,postcranial axial skeleton,posterior notochord,prechordal plate,presomitic mesoderm,rib,rostral presomitic mesoderm,sclerotomal cartilage,sclerotomal mesenchyme,sclerotome,stratum compactum,stratum spongiosum,syndetome,transverse process,urostyle,vacuolated notochordal tissue,ventrolateral edge of myotome,vertebra,vertebral centrum,vertebral column,vertebral element,axial mesoderm,axial skeleton,cervical vertebra,dermatome,dermis,elastica externa,flexural organ,gastrocoel roof plate,head somite 1,head somite 2,head somite 3,head somite 4,myotome of head somite 1,myotome of head somite 2,myotome of head somite 3,myotome of head somite 4,myotome of tail somite 14,myotome of tail somite 15,myotome of tail somite 16,myotome of tail somite 17,myotome of tail somite 18,myotome of trunk somite 1,myotome of trunk somite 10,myotome of trunk somite 11,myotome of trunk somite 12,myotome of trunk somite 13,myotome of trunk somite 2,myotome of trunk somite 3,myotome of trunk somite 4,myotome of trunk somite 5,myotome of trunk somite 6,myotome of trunk somite 7,myotome of trunk somite 8,myotome of trunk somite 9,notochord,notochordal epithelium,paraxial mesoderm,presomitic mesoderm,presumptive axial mesoderm,presumptive paraxial mesoderm,sacral vertebra,sclerotome of head somite 4,sclerotome of tail somite 14,sclerotome of tail somite 15,sclerotome of tail somite 16,sclerotome of tail somite 17,sclerotome of tail somite 18,sclerotome of trunk somite 1,sclerotome of trunk somite 10,sclerotome of trunk somite 11,sclerotome of trunk somite 12,sclerotome of trunk somite 13,sclerotome of trunk somite 2,sclerotome of trunk somite 3,sclerotome of trunk somite 4,sclerotome of trunk somite 5,sclerotome of trunk somite 6,sclerotome of trunk somite 7,sclerotome of trunk somite 8,sclerotome of trunk somite 9,somite,tail somite 14,tail somite 15,tail somite 16,tail somite 17,tail somite 18,trunk somite 1,trunk somite 10,trunk somite 11,trunk somite 12,trunk somite 13,trunk somite 2,trunk somite 3,trunk somite 4,trunk somite 5,trunk somite 6,trunk somite 7,trunk somite 8,trunk somite 9,urostyle

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Expression summary for hoxd1

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Experiment	Species	Images	Stages	Anatomy	Assay
In der Rieden PM et al. (2009) Assay Paper	laevis	1 image	NF stage 11 to NF stage 13	involuted dorsal mesoderm, paraxial mesoderm	in situ hybridization
Paper	laevis	1 image	NF stage 11 to NF stage 12.5	involuted dorsal mesoderm	in situ hybridization
Paper	laevis	1 image	NF stage 10 to NF stage 12	involuted dorsal mesoderm, paraxial mesoderm, presumptive paraxial mesoderm	in situ hybridization
Paper	laevis	1 image	NF stage 11	involuted dorsal mesoderm	in situ hybridization
Interaction between X-Delta-2 and Hox genes regulates segmentation and patterning of the anteroposterior axis. Paper	laevis	1 image	NF stage 10.5 to NF stage 12	involuted dorsal mesoderm, paraxial mesoderm	in situ hybridization
Regulation of the Xenopus labial homeodomain genes, HoxA1 and HoxD1: activation by retinoids and peptide growth factors. Paper	laevis	1 image	NF stage 16	notochord, prechordal plate	in situ hybridization
Retinoid signalling is required for information transfer from mesoderm to neuroectoderm during gastrulation. Paper	laevis	1 image	NF stage 13	involuted dorsal mesoderm	in situ hybridization
Retinoid signalling is required for information transfer from mesoderm to neuroectoderm during gastrulation. Paper	laevis	1 image	NF stage 11 to NF stage 12.5	axial mesoderm, involuted dorsal mesoderm, presumptive paraxial mesoderm	in situ hybridization
XMeis3 is necessary for mesodermal Hox gene expression and function. Paper	laevis	1 image	NF stage 11 to NF stage 13	involuted dorsal mesoderm, paraxial mesoderm	in situ hybridization
XMeis3 is necessary for mesodermal Hox gene expression and function. Paper	laevis	1 image	NF stage 11	involuted dorsal mesoderm	in situ hybridization
Janssens S et al. (2010) Assay Paper	laevis	1 image	NF stage 17	paraxial mesoderm	in situ hybridization
Wacker SA et al. (2004) Assay Paper	laevis	1 image	NF stage 26	presomitic mesoderm	in situ hybridization
Interaction between X-Delta-2 and Hox genes regulates segmentation and patterning of the anteroposterior axis. Paper	laevis	1 image	NF stage 11.5	involuted dorsal mesoderm	in situ hybridization
Interaction between X-Delta-2 and Hox genes regulates segmentation and patterning of the anteroposterior axis. Paper	laevis	1 image	NF stage 11	involuted dorsal mesoderm	in situ hybridization
The initiation of Hox gene expression in Xenopus laevis is controlled by Brachyury and BMP-4. Paper	laevis	1 image	NF stage 11	involuted dorsal mesoderm	in situ hybridization
The initiation of Hox gene expression in Xenopus laevis is controlled by Brachyury and BMP-4. Paper	laevis	1 image	NF stage 11	involuted dorsal mesoderm	in situ hybridization
The initiation of Hox gene expression in Xenopus laevis is controlled by Brachyury and BMP-4. Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
The initiation of Hox gene expression in Xenopus laevis is controlled by Brachyury and BMP-4. Paper	laevis	1 image	NF stage 11	involuted dorsal mesoderm	in situ hybridization
Wacker SA et al. (2004) Assay Paper	laevis	2 images	NF stage 10.5 to NF stage 11	involuted dorsal mesoderm	in situ hybridization

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