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tal1xenopus   

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Experiment details for tal1

Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus.

Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus.

Gene Clone Species Stages Anatomy
tal1.L laevis NF stage 26 to NF stage 33 and 34 ventral blood island

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  Figure S5. Temperature and MO Dosage Effects on Brachyury Phenotype and Immune Response Related Gene Transcription, Related to Figure 7 (A) WMISH for tp53 of late tailbud embryos injected with 4.5 or 18 ng of the t/t2 MO mix and developed at 22 ºC or 28.5ºC. *, Remark: Increasing incubation temperature also slightly up-regulated tp53 in the absence of any MO (confirmed by RT-qPCR, data not shown). (B) Multi-probe WMISH for various mesoderm cell lineage and derivative markers (cav1, notochord; hoxd8, pronephros; myh6, heart; tal1, ventral blood island; tbx6, paraxial mesoderm) and single WMISH for tp53, tp53inp1 and c3ar1 of mid-tailbud (stage 26) and late tailbud embryos (stage 34) injected with 6 or 18 ng of the t/t2 MO mix. White arrowheads point to the expression domains of tbx6 and cav1 that were not maintained in embryos without functional Brachyury. (C) WMISH for tp53inp1 on wild-type (or t/t2 heterozygous) and t/t2 null mutant embryos as well as embryos injected with 1 and 3 ng MO. The embryos were developed to late tailbud stage 34 at 25-26ºC. Scale bar, 0.5 mm.

Gene Clone Species Stages Anatomy
tal1.L laevis NF stage 28 ventral blood island

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  Figure 1. TALEN-Induced Deletions Nullify Brachyury Function (A) TALEN-induced 2- and 7-bp deletions in exon 1 of t (e1.2D) and exon 3 of t2 (e3.7D), and predicted frameshift translations generating truncated proteins of 59 and 170 amino acids (aa). These mutations were selected to generate a double heterozygous X. tropicalis line for the Brachyury paralogs t and t2 (te1.2D/+t2e3.7D/+). (B) t and t2 transcript levels in hetero- and homozygous embryos as measured by qRT-PCR at early neurula stage (n = 3, mean ± SD). Two-tailed t test: ∗p ≤ 0.05. (C) Multi-probe WMISH for various mesoderm cell lineage and derivative markers (actc1; cardiac and skeletal muscle; cav1, notochord; hoxd8, pronephros; myh6, heart; tal1, ventral blood island; tbx6, paraxial mesoderm) in wild-type and Brachyury (t/t2) null (KO) embryos, as well as embryos injected with four MOs targeting t and t2 (t/t2 MO mix) at mid-tailbud stage. Scale bar, 0.5 mm.

Gene Clone Species Stages Anatomy
tal1.L laevis NF stage 33 and 34 ventral blood island

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  Figure S3. Increased Transcription of tp53 Depending on GC Content of MO Does Not Cause More Apoptosis, Related to Figure 3 and 4 (A) TUNEL assay on morphants and sibling embryos from double heterozygous t -/+t2+/- parents. DNase-treated wild-type embryos were used as positive controls. (B) Single WMISH for tp53 and multi-probe WMISH for various mesoderm cell lineage and derivative markers (cav1, notochord; hoxd8, pronephros; myh6, heart; tal1, ventral blood island; tbx6, paraxial mesoderm) of late tailbud embryos injected with single MOs or tracer sulforhodamine-dextran. Scale bar, 0.5 mm