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Summary Expression Phenotypes Gene Literature (1) GO Terms (0) Nucleotides (103) Proteins (50) Interactants (78) Wiki
XB-GENEPAGE-989668

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for whrn - All

RefSeq mRNAs(12)
Models - Gene (25)
Models - mRNA (29)
mRNAs (12)
ESTs (19)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
XM_012969314 XM_012969314.3 whirlin isoform X1 4317 bp XP_012824768 X. tropicalis
XM_012969315 XM_012969315.3 whirlin isoform X1 4199 bp XP_012824769 X. tropicalis
XM_012969316 XM_012969316.3 whirlin isoform X2 4317 bp XP_012824770 X. tropicalis
XM_012969317 XM_012969317.3 whirlin isoform X3 4304 bp XP_012824771 X. tropicalis
XM_041573175 XM_041573175.1 XP_041429109.1 whirlin-like isoform X1 4111 bp XP_041429109 X. laevis.L
XM_041573176 XM_041573176.1 XP_041429110.1 whirlin-like isoform X1 3879 bp XP_041429110 X. laevis.L
XM_041573177 XM_041573177.1 XP_041429111.1 whirlin-like isoform X2 4107 bp XP_041429111 X. laevis.L
XM_041574843 XM_041574843.1 XP_041430777.1 whirlin isoform X1 3394 bp XP_041430777 X. laevis.S
XM_041574844 XM_041574844.1 XP_041430778.1 whirlin isoform X2 3392 bp XP_041430778 X. laevis.S
XM_041574845 XM_041574845.1 XP_041430779.1 whirlin isoform X3 3374 bp XP_041430779 X. laevis.S
XM_041574846 XM_041574846.1 XP_041430780.1 whirlin isoform X4 3274 bp XP_041430780 X. laevis.S
XM_041574847 XM_041574847.1 XP_041430781.1 whirlin isoform X5 2176 bp XP_041430781 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g011702 X. tropicalis
NCBI 10.1 XBXL10_1g37753 X. laevis.S
NCBI 10.1 XBXL10_1g34511 X. laevis.L
ENSEMBL 10.0 whrn X. tropicalis
JGI 9.1 Xelaev18041767m.g X. laevis.S
Xenbase 9.1 gene3531 X. tropicalis
Xenbase 9.2 gene5669 X. laevis.S
ENSEMBL 9.1 whrn X. tropicalis
JGI 7.1 Xetro.H00304 X. tropicalis
JGI 6.0 XeXenL6RMv10016969m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000014264 X. tropicalis
JGI 4.1 e_gw1.275.100.1 X. tropicalis
JGI 4.1 e_gw1.275.140.1 X. tropicalis
JGI 4.1 e_gw1.275.141.1 X. tropicalis
JGI 4.1 gw1.275.100.1 X. tropicalis
JGI 4.1 gw1.275.140.1 X. tropicalis
JGI 4.1 gw1.275.141.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2750013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2750099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2750139 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2750140 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2750023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2750011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_275000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_275000011 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA058128 X. tropicalis
NCBI 10.1 XBmRNA65214 X. laevis.L
NCBI 10.1 XBmRNA71357 X. laevis.S
ENSEMBL 10.0 ENSXETT00000031231 X. tropicalis
JGI 9.1 Xelaev18041767m X. laevis.S
Xenbase 9.1 rna11601 X. tropicalis
Xenbase 9.2 rna16599 X. laevis.S
ENSEMBL 9.1 ENSXETT00000031231 X. tropicalis
JGI 7.1 Xetro.H00304.1 X. tropicalis
JGI 6.0 XeXenL6RMv10016969m X. laevis.S
JGI 4.1 e_gw1.275.100.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031231 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030044 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031232 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054426 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024860 X. tropicalis
JGI 4.1 e_gw1.275.140.1 X. tropicalis
JGI 4.1 e_gw1.275.141.1 X. tropicalis
JGI 4.1 gw1.275.100.1 X. tropicalis
JGI 4.1 gw1.275.140.1 X. tropicalis
JGI 4.1 gw1.275.141.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2750013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2750099 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2750139 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2750140 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2750023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2750011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_275000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_275000011 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
XM_012969317 X. tropicalis
XM_012969316 X. tropicalis
XM_012969315 X. tropicalis
XM_012969314 X. tropicalis
XM_041574847 X. laevis.S
XM_041574846 X. laevis.S
XM_041574845 X. laevis.S
XM_041574844 X. laevis.S
XM_041574843 X. laevis.S
XM_041573177 X. laevis.L
XM_041573176 X. laevis.L
XM_041573175 X. laevis.L

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7699317 CX932008 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5000 CX936587 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7616437 CX392881 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7654653 CX824131 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7688085 CX910620 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689972 CX914281 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690182 CX914422 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695439 CX923902 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7699317 CX932007 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7688085 CX910619 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689972 CX914280 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695439 CX923901 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO5000 CX936586 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7616437 CX392880 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7654653 CX824130 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7690182 CX914421 3' X. tropicalis NIH_XGC_tropTe4 testis frog
XL206k04 BJ623945 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8538386 EB480423 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
XL206k04 BJ640533 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5