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Summary Expression Phenotypes Gene Literature (5) GO Terms (23) Nucleotides (929) Proteins (59) Interactants (296) Wiki
XB-GENEPAGE-971479

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sec61a1 - All

RefSeq mRNAs(3)
Models - Gene (35)
Models - mRNA (43)
mRNAs (6)
ESTs (711)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001004801 NM_001004801.2 protein transport protein Sec61 subunit alpha isoform 1 2352 bp NP_001004801 X. tropicalis
NM_001086775 NM_001086775.1 Sec61 translocon alpha 1 subunit S homeolog 1894 bp NP_001080244 X. laevis.S
XM_018259078 XM_018259078.2 protein transport protein Sec61 subunit alpha 2452 bp XP_018114567 X. laevis.L

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g19980 X. laevis.L
NCBI 10.1 XBXL10_1g22255 X. laevis.S
NCBI 10.0 XBXT10g009465 X. tropicalis
ENSEMBL 10.0 sec61a1 X. tropicalis
Xenbase 9.2 gene4180 X. laevis.L
Xenbase 9.2 gene14349 X. laevis.S
JGI 9.1 Xelaev18023991m.g X. laevis.L
JGI 9.1 Xelaev18025899m.g X. laevis.S
Xenbase 9.1 gene8268 X. tropicalis
ENSEMBL 9.1 sec61a1 X. tropicalis
JGI 8.0 Xetrov14020468m.g X. tropicalis
JGI 7.2 Xelaev16038093m.g X. laevis.S
JGI 7.1 Xetro.D02239 X. tropicalis
JGI 6.0 XeXenL6RMv10008162m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000024743 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_44000015 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_440023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000091 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000092 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_44000033 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_44000023 X. tropicalis
JGI 4.1 e_gw1.44.290.1 X. tropicalis
JGI 4.1 e_gw1.44.291.1 X. tropicalis
JGI 4.1 e_gw1.44.38.1 X. tropicalis
JGI 4.1 gw1.44.290.1 X. tropicalis
JGI 4.1 gw1.44.291.1 X. tropicalis
JGI 4.1 gw1.44.38.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_440056 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440290 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440291 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440090 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440091 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440092 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_440032 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA36974 X. laevis.L
NCBI 10.1 XBmRNA41374 X. laevis.S
NCBI 10.0 mRNA046722 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061328 X. tropicalis
Xenbase 9.2 rna12171 X. laevis.L
Xenbase 9.2 rna41797 X. laevis.S
ENSEMBL 9.1 ENSXETT00000068918 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101614 X. tropicalis
ENSEMBL 9.1 ENSXETT00000053271 X. tropicalis
Xenbase 9.1 rna26718 X. tropicalis
JGI 9.1 Xelaev18025899m X. laevis.S
JGI 9.1 Xelaev18023991m X. laevis.L
ENSEMBL 9.1 ENSXETT00000061328 X. tropicalis
JGI 8.0 Xetrov14020468m X. tropicalis
JGI 7.2 Xelaev16038093m X. laevis.S
JGI 7.1 Xetro.D02239.1 X. tropicalis
JGI 7.1 Xetro.D02239.2 X. tropicalis
JGI 7.1 Xetro.D02239.5 X. tropicalis
JGI 7.1 Xetro.D02239.6 X. tropicalis
JGI 7.1 Xetro.D02239.4 X. tropicalis
JGI 7.1 Xetro.D02239.3 X. tropicalis
JGI 6.0 XeXenL6RMv10008162m X. laevis.S
JGI 4.1 fgenesh1_pm.C_scaffold_44000033 X. tropicalis
JGI 4.1 e_gw1.44.291.1 X. tropicalis
JGI 4.1 e_gw1.44.38.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053271 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_440023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440090 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440091 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_440092 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_440032 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_440056 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440290 X. tropicalis
JGI 4.1 estExt_Genewise1.C_440291 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_44000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000091 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_44000092 X. tropicalis
JGI 4.1 e_gw1.44.290.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_44000015 X. tropicalis
JGI 4.1 gw1.44.290.1 X. tropicalis
JGI 4.1 gw1.44.291.1 X. tropicalis
JGI 4.1 gw1.44.38.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:5335742 BC074553 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu057c05 CR848298 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001004801 X. tropicalis
IMAGE:5572471 BC045117 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086775 X. laevis.S
XM_018259078 X. laevis.L

ESTs (711)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu075d05 BX683513 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA075p18 BX733058 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA048d12 BX727201 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA051n21 BX726204 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA049p24 BX724714 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7578128 CX416378 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st88i21 DC188580 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7578152 CX416536 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st92g10 DC189495 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7578918 CX417835 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st111n24 DC194863 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7530562 CX420040 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7027929 CF781861 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7577102 CX423038 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8865297 EL702313 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7533919 CX427286 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7026720 CF782949 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7575896 CX431359 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7027282 CF784448 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7576309 CX431556 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8910075 EL805535 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7572846 CX436145 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541788 CX448569 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7093733 CK654743 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7569978 CX454007 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568614 CX457250 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7094354 CK654945 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7560734 CX463694 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr18I22 CN100845 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7535234 CX476373 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr14M12 CN098320 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7536031 CX476944 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs18L23 CN080894 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7565572 CX482514 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu008e15 AL635353 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7549909 CX485128 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554664 CX493502 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu020h10 AL635655 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7552942 CX495955 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu006i01 AL637266 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7558907 CX498085 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu020o23 AL637908 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7556925 CX504740 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu018b14 AL638469 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7567170 CX507998 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu024a05 AL639286 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7550706 CX509817 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA035k12 BX719622 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA015o18 BX715391 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA020d15 BX712067 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA004e17 BX709430 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA007a15 BX709396 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA008a15 BX706113 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA001k20 BX704829 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA048a22 CR588820 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA045g19 CR583867 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053e03 CR582577 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019e11 CR582060 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036c16 CR581110 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA043b07 CR576827 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA024c10 CR571073 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014a24 CR565334 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006b02 CR562765 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007b17 CR560088 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA010k21 CR448829 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA002j05 CR447379 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA023g14 CR441857 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA078e10 CR441084 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA039j15 CR437592 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA056a07 CR433780 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA079i13 CR432936 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA044c16 CR430338 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA048b07 CR427410 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA019o01 CR422950 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA070a18 CR422091 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA020o01 CR421383 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA029g23 CR419649 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018j23 CR418098 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025p11 CR415867 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA013m02 CR409959 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6976206 CF264495 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6976206 CF242297 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977536 CF224482 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6976891 CF223298 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6976463 CF223153 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6979615 CF150213 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6980009 CF149335 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6980427 CF148143 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5335742 BQ520815 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5335901 BQ520730 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu003p21 AL640069 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu002p16 AL640474 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027o22 AL641321 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022o04 AL642000 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu008p09 AL642551 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu027o11 AL644304 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030f02 AL655570 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034b23 AL656240 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031a23 AL656263 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21