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Summary Expression Phenotypes Gene Literature (4) GO Terms (2) Nucleotides (149) Proteins (41) Interactants (41) Wiki
XB-GENEPAGE-942747

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sdr16c5 - All

RefSeq mRNAs(2)
Models - Gene (21)
Models - mRNA (26)
mRNAs (9)
ESTs (57)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001004963 NM_001004963.1 epidermal retinol dehydrogenase 2 1875 bp NP_001004963 X. tropicalis
NM_001092252 NM_001092252.1 short chain dehydrogenase/reductase family 16C member 5 L homeolog 1100 bp NP_001085721 X. laevis.L

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g002355 X. tropicalis
NCBI 10.1 XBXL10_1g27961 X. laevis.L
ENSEMBL 10.0 sdr16c5 X. tropicalis
JGI 9.1 Xelaev18032037m.g X. laevis.L
Xenbase 9.1 gene28136 X. tropicalis
Xenbase 9.2 gene8950 X. laevis.L
ENSEMBL 9.1 sdr16c5 X. tropicalis
JGI 8.0 Xetrov14025754m.g X. tropicalis
JGI 7.1 Xetro.F00458 X. tropicalis
JGI 7.2 Xelaev16063604m.g X. laevis.L
JGI 6.0 XeXenL6RMv10046096m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005655 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_83000019 X. tropicalis
JGI 4.1 e_gw1.83.153.1 X. tropicalis
JGI 4.1 e_gw1.83.154.1 X. tropicalis
JGI 4.1 e_gw1.83.46.1 X. tropicalis
JGI 4.1 gw1.83.153.1 X. tropicalis
JGI 4.1 gw1.83.154.1 X. tropicalis
JGI 4.1 gw1.83.46.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_83000073 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_83000074 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA011936 X. tropicalis
NCBI 10.1 XBmRNA52494 X. laevis.L
ENSEMBL 10.0 ENSXETT00000118961 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031733 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107355 X. tropicalis
JGI 9.1 Xelaev18032037m X. laevis.L
Xenbase 9.1 rna54536 X. tropicalis
Xenbase 9.2 rna26067 X. laevis.L
ENSEMBL 9.1 ENSXETT00000031733 X. tropicalis
JGI 8.0 Xetrov14025754m X. tropicalis
JGI 7.1 Xetro.F00458.1 X. tropicalis
JGI 7.1 Xetro.F00458.2 X. tropicalis
JGI 7.1 Xetro.F00458.3 X. tropicalis
JGI 7.2 Xelaev16063604m X. laevis.L
JGI 6.0 XeXenL6RMv10046096m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_83000019 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031733 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012478 X. tropicalis
JGI 4.1 e_gw1.83.153.1 X. tropicalis
JGI 4.1 e_gw1.83.154.1 X. tropicalis
JGI 4.1 e_gw1.83.46.1 X. tropicalis
JGI 4.1 gw1.83.153.1 X. tropicalis
JGI 4.1 gw1.83.154.1 X. tropicalis
JGI 4.1 gw1.83.46.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_83000073 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_83000074 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001004963 X. tropicalis
IMAGE:6981468 BC075474 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu098h07 CT025330 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012964524 X. tropicalis
IMAGE:5505788 BC073248 X. laevis.L
NM_001092252 X. laevis.L
XM_018266456 X. laevis.L
XM_018266454 X. laevis.L
XM_018266453 X. laevis.L

ESTs (57)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8914926 EL837997 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8914455 EL826909 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8913017 EL824388 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs25D06 CN085485 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15O24 CN078770 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7634426 CX338032 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613310 CX388678 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7538321 CX447808 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537573 CX446306 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7750033 DN048438 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7557621 CX506212 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550595 CX509393 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7802136 DR836211 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7748943 DN045541 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7736177 DN022475 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7719086 CX982458 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7795020 CX964388 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7446848 CV632482 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7520864 CX468558 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526886 CX444278 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas018e04 AL629454 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu098h07 AL802989 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu001c06 AL634313