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Summary Expression Phenotypes Gene Literature (12) GO Terms (6) Nucleotides (135) Proteins (44) Interactants (274) Wiki
XB-GENEPAGE-5932508

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for mmp3 - All

RefSeq mRNAs(2)
Models - Gene (27)
Models - mRNA (31)
mRNAs (5)
ESTs (63)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001030331 matrix metallopeptidase 3 precursor 2083 bp NP_001025502 X. tropicalis
NM_001093594 matrix metallopeptidase 3 L homeolog 2440 bp NP_001087063 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g001549 X. tropicalis
NCBI 10.1 XBXL10_1g8454 X. laevis.L
ENSEMBL 10.0 mmp3 X. tropicalis
JGI 9.1 Xelaev18013820m.g X. laevis.L
Xenbase 9.1 gene25437 X. tropicalis
Xenbase 9.2 gene44194 X. laevis.L
ENSEMBL 9.1 mmp3 X. tropicalis
JGI 8.0 Xetrov14010858m.g X. tropicalis
JGI 7.1 Xetro.B02008 X. tropicalis
JGI 7.2 Xelaev16066657m.g X. laevis.L
JGI 6.0 XeXenL6RMv10019334m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022185 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1190009 X. tropicalis
JGI 4.1 gw1.119.214.1 X. tropicalis
JGI 4.1 gw1.119.254.1 X. tropicalis
JGI 4.1 gw1.119.309.1 X. tropicalis
JGI 4.1 e_gw1.119.214.1 X. tropicalis
JGI 4.1 e_gw1.119.254.1 X. tropicalis
JGI 4.1 e_gw1.119.309.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1190007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190214 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190254 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190308 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1190003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_119000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_119000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000009 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA007791 X. tropicalis
NCBI 10.1 XBmRNA16009 X. laevis.L
ENSEMBL 10.0 ENSXETT00000048006 X. tropicalis
JGI 9.1 Xelaev18013820m X. laevis.L
Xenbase 9.1 rna50313 X. tropicalis
Xenbase 9.2 rna87983 X. laevis.L
ENSEMBL 9.1 ENSXETT00000048005 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091601 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048006 X. tropicalis
JGI 8.0 Xetrov14010858m X. tropicalis
JGI 7.1 Xetro.B02008.2 X. tropicalis
JGI 7.1 Xetro.B02008.1 X. tropicalis
JGI 7.2 Xelaev16066657m X. laevis.L
JGI 6.0 XeXenL6RMv10019334m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1190009 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048006 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048005 X. tropicalis
JGI 4.1 e_gw1.119.214.1 X. tropicalis
JGI 4.1 e_gw1.119.254.1 X. tropicalis
JGI 4.1 e_gw1.119.309.1 X. tropicalis
JGI 4.1 gw1.119.214.1 X. tropicalis
JGI 4.1 gw1.119.254.1 X. tropicalis
JGI 4.1 gw1.119.309.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1190007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190214 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190254 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1190308 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1190003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_119000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_119000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000009 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001030331 X. tropicalis
TNeu101m23 CR760009 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012957070 X. tropicalis
IMAGE:5537465 BC077966 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093594 X. laevis.L

ESTs (63)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9011999 EL857022 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9009949 EL854130 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8871392 EL713769 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st6h24 DC174859 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st116f10 DC193540 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st14c11 DC166834 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13c11 DC166533 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st20e15 DC168894 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7552404 CX495222 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547085 CX500762 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545456 CX487704 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542665 CX449670 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541306 CX448217 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533463 CX434667 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573032 CX436448 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566297 CX483529 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA019c18 CR571631