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Summary Expression Phenotypes Gene Literature (5) GO Terms (4) Nucleotides (96) Proteins (34) Interactants (53) Wiki
XB-GENEPAGE-5904899

Show:     All X. tropicalis X. laevis

Nucleotide sequences for XB5904899 - All

RefSeq mRNAs(3)
Models - Gene (16)
Models - mRNA (25)
mRNAs (5)
ESTs (31)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001113936 NM_001113936.1 uncharacterized protein LOC100135246 3408 bp NP_001107408 X. tropicalis
NM_001087989 NM_001087989.1 PR domain containing 9 L homeolog 1899 bp NP_001081458 X. laevis.L
XM_041565307 XM_041565307.1 XP_041421241.1 PR domain containing 9 L homeolog isoform X1 1967 bp XP_041421241 X. laevis.L

Models - Gene (16)

Source Version Model Species
NCBI 10.1 XBXL10_1g26516 X. laevis.L
NCBI 10.0 XBXT10g022181 X. tropicalis
Xenbase 9.2 gene12742 X. laevis.L
Xenbase 9.1 gene18248 X. tropicalis
JGI 7.1 Xetro.F01987 X. tropicalis
ENSEMBL 4.1 ENSXETG00000011713 X. tropicalis
JGI 4.1 e_gw1.1005.47.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1005000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1005000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1005000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1005000003 X. tropicalis
JGI 4.1 gw1.1005.41.1 X. tropicalis
JGI 4.1 gw1.1005.47.1 X. tropicalis
JGI 4.1 gw1.1005.48.1 X. tropicalis
JGI 4.1 e_gw1.1005.41.1 X. tropicalis
JGI 4.1 e_gw1.1005.48.1 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA49511 X. laevis.L
NCBI 10.0 mRNA099611 X. tropicalis
Xenbase 9.2 rna37026 X. laevis.L
Xenbase 9.1 rna38880 X. tropicalis
JGI 7.1 Xetro.F01987.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025617 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025619 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025620 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025623 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025624 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025625 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052513 X. tropicalis
JGI 4.1 e_gw1.1005.41.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1005000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1005000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1005000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1005000002 X. tropicalis
JGI 4.1 gw1.1005.41.1 X. tropicalis
JGI 4.1 gw1.1005.47.1 X. tropicalis
JGI 4.1 gw1.1005.48.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052528 X. tropicalis
JGI 4.1 e_gw1.1005.47.1 X. tropicalis
JGI 4.1 e_gw1.1005.48.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000011546 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025106 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7808579 BC157514 X. tropicalis
NM_001113936 X. tropicalis
NM_001087989 X. laevis.L
U65897 X. laevis.L
XM_041565307 X. laevis.L

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas013j17 AL632143 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079e13 AL782536 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095e13 AL962390 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7520678 CX468597 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543471 CX458614 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568695 CX456818 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas048p13 AL651167 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7520678 CX468596 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas095e13 BX751377 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079e13 BX751849 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7568695 CX456817 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543471 CX458613 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL106m07 BJ068455 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7297071 CO385018 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
BG410135 BG410135 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
XL174l04 BJ615840 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL192b15 BJ620180 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL219j02 BJ627842 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl296f16 DC122023 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL034f05 BJ043265 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5542615 BQ735443 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6936865 CD098557 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8531140 EB467064 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:3380425 BE507178 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XL517b14ex BP706188 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL219j02 BJ644129 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL192b15 BJ636811 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL174l04 BJ632455 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:7297071 CO385073 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:3380425 BI936440 3' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XL517b14ex BP738635 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5