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Summary Expression Phenotypes Gene Literature (2) GO Terms (10) Nucleotides (283) Proteins (62) Interactants (149) Wiki
XB-GENEPAGE-5886094

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for spdyc - All

RefSeq mRNAs(2)
Models - Gene (31)
Models - mRNA (38)
mRNAs (14)
ESTs (49)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001088245 NM_001088245.1 speedy protein 1-A 1575 bp NP_001081714 X. laevis.S
NM_001088507 NM_001088507.1 speedy protein 1-B 1357 bp NP_001081976 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g012442 X. tropicalis
NCBI 10.1 XBXL10_1g18083 X. laevis.L
NCBI 10.1 XBXL10_1g20693 X. laevis.S
ENSEMBL 10.0 spdyc X. tropicalis
JGI 9.1 Xelaev18022158m.g X. laevis.L
JGI 9.1 Xelaev18024255m.g X. laevis.S
Xenbase 9.1 gene6101 X. tropicalis
Xenbase 9.2 gene950 X. laevis.L
Xenbase 9.2 gene18037 X. laevis.S
ENSEMBL 9.1 spdyc X. tropicalis
JGI 7.1 Xetro.D00984 X. tropicalis
JGI 7.2 Xelaev16028406m.g X. laevis.L
JGI 7.2 Xelaev16061694m.g X. laevis.S
JGI 6.0 XeXenL6RMv10036843m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036843m.g X. laevis.S
JGI 6.0 XeXenL6RMv10050038m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000001636 X. tropicalis
JGI 4.1 e_gw1.296.113.1 X. tropicalis
JGI 4.1 e_gw1.296.114.1 X. tropicalis
JGI 4.1 e_gw1.296.115.1 X. tropicalis
JGI 4.1 gw1.296.113.1 X. tropicalis
JGI 4.1 gw1.296.114.1 X. tropicalis
JGI 4.1 gw1.296.115.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2960047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960115 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2960063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2960023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_296000064 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_296000024 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.0 mRNA061633 X. tropicalis
NCBI 10.1 XBmRNA33385 X. laevis.L
NCBI 10.1 XBmRNA38075 X. laevis.S
ENSEMBL 10.0 ENSXETT00000106729 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122650 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108033 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108604 X. tropicalis
ENSEMBL 10.0 ENSXETT00000003450 X. tropicalis
JGI 9.1 Xelaev18022158m X. laevis.L
JGI 9.1 Xelaev18024255m X. laevis.S
Xenbase 9.1 rna19700 X. tropicalis
Xenbase 9.2 rna2790 X. laevis.L
Xenbase 9.2 rna52715 X. laevis.S
ENSEMBL 9.1 ENSXETT00000003450 X. tropicalis
JGI 7.1 Xetro.D00984.4 X. tropicalis
JGI 7.1 Xetro.D00984.2 X. tropicalis
JGI 7.1 Xetro.D00984.1 X. tropicalis
JGI 7.1 Xetro.D00984.3 X. tropicalis
JGI 7.2 Xelaev16028406m X. laevis.L
JGI 7.2 Xelaev16061694m X. laevis.S
JGI 6.0 XeXenL6RMv10036843m X. laevis.L
JGI 6.0 XeXenL6RMv10036843m X. laevis.S
JGI 6.0 XeXenL6RMv10050038m X. laevis.S
JGI 4.1 e_gw1.296.113.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003450 X. tropicalis
JGI 4.1 e_gw1.296.114.1 X. tropicalis
JGI 4.1 e_gw1.296.115.1 X. tropicalis
JGI 4.1 gw1.296.113.1 X. tropicalis
JGI 4.1 gw1.296.114.1 X. tropicalis
JGI 4.1 gw1.296.115.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2960047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960115 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2960063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2960023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_296000064 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_296000024 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
XM_004913654 X. tropicalis
XM_004913653 X. tropicalis
XM_031900629 X. tropicalis
IMAGE:8331573 BC123293 X. laevis.L
IMAGE:5048904 BC106655 X. laevis.L
IMAGE:6318356 BC097505 X. laevis.L
IMAGE:6318927 BC071078 X. laevis.L
IMAGE:6635982 BC068639 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
AJ133500 X. laevis.L
AJ133499 X. laevis.S
AJ249978 X. laevis.S
AJ133117 X. laevis.L
NM_001088245 X. laevis.S
NM_001088507 X. laevis.L

ESTs (49)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8857683 EL820958 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8927260 EL674373 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CAAO8855 CX956729 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7530943 CX420355 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561898 CX465757 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559433 CX514502 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7748682 DN045711 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TGas038l07 AL648242 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas018f20 AL629647 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8857683 EL820959 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8927260 EL674372 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CAAO8855 CX956728 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7530943 CX420354 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559433 CX514501 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xl292b10 DC120895 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl326f16 DC130960 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl230l05 DC102878 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7973953 DR716875 5' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL198i07 BJ621742 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6870735 CA982122 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6870593 CA982015 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6324224 CA972459 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6322597 CA971267 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6635982 BU910204 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3472884 BI444496 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3300791 BE131818 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
BE025660 BE025660 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
AW872220 AW872220 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
AW872162 AW872162 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0143E07 AW644729 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0131D07 AW643666 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0083G10 AW639510 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0069G02 AW638414 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002c22 AW199578 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc001n01 AW147535 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl292b10 DC086114 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl230l05 DC068781 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl326f16 DC095063 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk142n24ex DC016141 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7973953 DR716876 3' X. laevis.S NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL199i07 BJ638710 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL198i07 BJ638447 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170p15 BJ631859 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3300791 BE490904 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
BE026427 BE026427 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
AW782803 AW782803 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
AW782750 AW782750 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc001m18 AW148108 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc002c22 AW147823 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)