Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (6) Nucleotides (204) Proteins (63) Interactants (40) Wiki
XB-GENEPAGE-494920

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for syngr1 - All

Models - Gene (30)
Models - mRNA (41)
mRNAs (14)
ESTs (58)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g004597 X. tropicalis
NCBI 10.1 XBXL10_1g19701 X. laevis.L
NCBI 10.1 XBXL10_1g22025 X. laevis.S
ENSEMBL 10.0 tab1 X. tropicalis
JGI 9.1 Xelaev18023661m.g X. laevis.L
JGI 9.1 Xelaev18025651m.g X. laevis.S
Xenbase 9.1 gene615 X. tropicalis
Xenbase 9.2 gene427 X. laevis.L
Xenbase 9.2 gene1377 X. laevis.S
ENSEMBL 9.1 tab1 X. tropicalis
JGI 7.1 Xetro.D01318 X. tropicalis
JGI 7.2 Xelaev16073631m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009725m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006915 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_69000004 X. tropicalis
JGI 4.1 e_gw1.69.154.1 X. tropicalis
JGI 4.1 e_gw1.69.205.1 X. tropicalis
JGI 4.1 e_gw1.69.206.1 X. tropicalis
JGI 4.1 gw1.69.154.1 X. tropicalis
JGI 4.1 gw1.69.205.1 X. tropicalis
JGI 4.1 gw1.69.206.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_690009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_690154 X. tropicalis
JGI 4.1 estExt_Genewise1.C_690205 X. tropicalis
JGI 4.1 estExt_Genewise1.C_690206 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_690017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_690005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_69000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000019 X. tropicalis

Models - mRNA (41)

Source Version Model Species
NCBI 10.0 mRNA022880 X. tropicalis
NCBI 10.1 XBmRNA36443 X. laevis.L
NCBI 10.1 XBmRNA40935 X. laevis.S
ENSEMBL 10.0 ENSXETT00000089002 X. tropicalis
ENSEMBL 10.0 ENSXETT00000015109 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063271 X. tropicalis
ENSEMBL 10.0 ENSXETT00000015111 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097542 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091186 X. tropicalis
JGI 9.1 Xelaev18023661m X. laevis.L
JGI 9.1 Xelaev18025651m X. laevis.S
Xenbase 9.1 rna1913 X. tropicalis
Xenbase 9.2 rna1226 X. laevis.L
Xenbase 9.2 rna4027 X. laevis.S
ENSEMBL 9.1 ENSXETT00000063271 X. tropicalis
ENSEMBL 9.1 ENSXETT00000015109 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089002 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097542 X. tropicalis
ENSEMBL 9.1 ENSXETT00000015111 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085791 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091186 X. tropicalis
JGI 7.1 Xetro.D01318.1 X. tropicalis
JGI 7.2 Xelaev16073631m X. laevis.L
JGI 6.0 XeXenL6RMv10009725m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_69000004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015109 X. tropicalis
JGI 4.1 e_gw1.69.154.1 X. tropicalis
JGI 4.1 e_gw1.69.205.1 X. tropicalis
JGI 4.1 e_gw1.69.206.1 X. tropicalis
JGI 4.1 gw1.69.154.1 X. tropicalis
JGI 4.1 gw1.69.205.1 X. tropicalis
JGI 4.1 gw1.69.206.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_690009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_690154 X. tropicalis
JGI 4.1 estExt_Genewise1.C_690205 X. tropicalis
JGI 4.1 estExt_Genewise1.C_690206 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_690017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_690005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_69000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_69000019 X. tropicalis

mRNAs (14)

Clone Accession Species Library Anatomy Stage
NM_001016195 X. tropicalis
TEgg108p09 CR926351 X. tropicalis
IMAGE:8917306 BC153693 X. tropicalis NICHD_XGC_tropTe1 testis frog
XM_012961070 X. tropicalis
IMAGE:7210719 BC087447 X. laevis.S
IMAGE:6326868 BC088923 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
AB072005 X. laevis.L
NM_001095314 X. laevis.S
NM_001090320 X. laevis.L
IMAGE:9040989 BC169355 X. laevis.L
IMAGE:9040985 BC169351 X. laevis.L
XM_018259702 X. laevis.S
XM_018256568 X. laevis.L
XM_041591393 X. laevis.S

ESTs (58)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9008631 EL837293 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8922005 EL836431 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917306 EL830645 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs23B08 CN084177 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19P14 CN081717 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15M20 CN078746 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XZT1503 CX360753 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8361 CX955813 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7791222 CX324728 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787746 CX329941 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630772 CX396431 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7599278 CX344152 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598225 CX387629 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7846982 DT531070 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7845613 DT528061 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7709002 CX962960 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7694987 CX923388 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687962 CX910766 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7659467 CX838859 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652703 CX820669 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650640 CX811614 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647477 CX805886 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643292 CX798619 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA044i10 CR583640 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA027p18 CR572323 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas127b24 AL969039 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127b22 AL969038 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA009h15 BX708967 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9008631 EL837294 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8922005 EL836432 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917306 EL830646 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs23B08 CN084176 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19P14 CN081716 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15M20 CN078745 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XZT1503 CX360752 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787746 CX329940 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7846982 DT531069 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7845613 DT528060 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7652703 CX820668 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7791222 DR905917 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7599278 DR892248 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7694987 CX923387 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687962 CX910765 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7659467 CX838858 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650640 CX811613 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647477 CX805885 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7630772 CX396430 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598225 CX387628 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA044i10 CR583641 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas127b22 BX758278 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA009h15 BX708968 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
p7d11 AU244849 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
IMAGE:7980641 DR718009 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGp998L188086 BX855026 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:6326868 CA974309 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6325990 CA973678 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7980641 DR718033 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4678090 BI443185 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage