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Summary Expression Phenotypes Gene Literature (45) GO Terms (9) Nucleotides (229) Proteins (55) Interactants (696) Wiki
XB-GENEPAGE-486940

Show:     All X. tropicalis X. laevis

Nucleotide sequences for prickle1 - All

RefSeq mRNAs(6)
Models - Gene (28)
Models - mRNA (31)
mRNAs (12)
ESTs (120)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001016939 NM_001016939.1 prickle-like protein 1 4361 bp NP_001016939 X. tropicalis
XM_012959068 XM_012959068.3 prickle-like protein 1 isoform X1 4334 bp XP_012814522 X. tropicalis
XM_031897950 XM_031897950.1 XP_031753810.1 prickle-like protein 1 isoform X2 4725 bp XP_031753810 X. tropicalis
NM_001088688 NM_001088688.1 prickle-like protein 1-A 4579 bp NP_001082157 X. laevis.S
XM_018254155 XM_018254155.2 prickle-like protein 1-A isoform X1 4933 bp XP_018109644 X. laevis.S
NM_001088700 NM_001088700.1 prickle-like protein 1-B 4186 bp NP_001082169 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g16199 X. laevis.S
NCBI 10.1 XBXL10_1g12648 X. laevis.L
NCBI 10.0 XBXT10g005976 X. tropicalis
ENSEMBL 10.0 prickle1 X. tropicalis
Xenbase 9.2 gene35061 X. laevis.L
Xenbase 9.2 gene12046 X. laevis.S
JGI 9.1 Xelaev18017605m.g X. laevis.L
JGI 9.1 Xelaev18021113m.g X. laevis.S
Xenbase 9.1 gene5871 X. tropicalis
ENSEMBL 9.1 prickle1 X. tropicalis
JGI 7.2 Xelaev16070894m.g X. laevis.S
JGI 7.2 Xelaev16041103m.g X. laevis.L
JGI 7.1 Xetro.C01785 X. tropicalis
JGI 6.0 XeXenL6RMv10032973m.g X. laevis.S
JGI 6.0 XeXenL6RMv10016444m.g X. laevis.S
JGI 6.0 XeXenL6RMv10016444m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006797 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_36000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_36000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_36000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_36000039 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_36000004 X. tropicalis
JGI 4.1 e_gw1.36.161.1 X. tropicalis
JGI 4.1 gw1.36.164.1 X. tropicalis
JGI 4.1 gw1.36.162.1 X. tropicalis
JGI 4.1 gw1.36.161.1 X. tropicalis
JGI 4.1 e_gw1.36.164.1 X. tropicalis
JGI 4.1 e_gw1.36.162.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA30398 X. laevis.S
NCBI 10.1 XBmRNA23701 X. laevis.L
ENSEMBL 10.0 ENSXETT00000093328 X. tropicalis
NCBI 10.0 mRNA029590 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014840 X. tropicalis
Xenbase 9.2 rna74856 X. laevis.L
Xenbase 9.2 rna34994 X. laevis.S
JGI 9.1 Xelaev18017605m X. laevis.L
JGI 9.1 Xelaev18021113m X. laevis.S
ENSEMBL 9.1 ENSXETT00000093328 X. tropicalis
ENSEMBL 9.1 ENSXETT00000014840 X. tropicalis
Xenbase 9.1 rna18977 X. tropicalis
JGI 7.2 Xelaev16041103m X. laevis.L
JGI 7.2 Xelaev16070894m X. laevis.S
JGI 7.1 Xetro.C01785.1 X. tropicalis
JGI 7.1 Xetro.C01785.2 X. tropicalis
JGI 6.0 XeXenL6RMv10032973m X. laevis.S
JGI 6.0 XeXenL6RMv10016444m X. laevis.S
JGI 6.0 XeXenL6RMv10016444m X. laevis.L
JGI 4.1 gw1.36.164.1 X. tropicalis
JGI 4.1 e_gw1.36.162.1 X. tropicalis
JGI 4.1 e_gw1.36.164.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014840 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_36000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_36000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_36000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_36000013 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_36000004 X. tropicalis
JGI 4.1 gw1.36.161.1 X. tropicalis
JGI 4.1 gw1.36.162.1 X. tropicalis
JGI 4.1 e_gw1.36.161.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:7572239 BC167911 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TEgg011j18 CR761986 X. tropicalis
NM_001016939 X. tropicalis
XM_012959068 X. tropicalis
XM_031897950 X. tropicalis
AF387815 X. laevis.S
IMAGE:6631640 BC098954 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001088688 X. laevis.S
XM_018254155 X. laevis.S
AY055473 X. laevis.L
IMAGE:5156646 BC073208 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001088700 X. laevis.L

ESTs (120)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7521726 CX470514 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas129f24 AL961648 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7551192 CX510484 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562210 CX466258 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8914369 EL826967 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
XZT3203 CX361002 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7567332 CX507787 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528166 CX424783 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578114 CX424389 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7516024 CX747152 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TTpA032h23 BX717751 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5308160 BQ389797 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7572239 CX513642 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas006d05 AL595551 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7558349 CX497201 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
L1G3b5 AL643733 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043i03 AL651450 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st5p18 DC174707 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs28M01 CN087122 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TNeu107b04 AL790639 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu129m07 AL801172 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7548931 CX491000 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas081c03 AL777000 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu086h02 BX698875 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7551192 CX510483 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas081c03 BX752653 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5308160 BQ389796 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7567332 CX507786 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558349 CX497200 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst5p18 DC144382 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7548931 CX490999 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521726 CX470513 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs28M01 CN087121 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7562210 CX466257 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA032h23 BX717752 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA032h21 BX717750 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu129m07 BX698605 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7572239 CX513641 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL434h08ex BP680310 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6326672 CA974170 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7299380 CO384388 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:3402645 BG364652 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6631640 BU906620 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6631734 BU906705 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6632731 BU907530 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5155004 CA792181 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156646 CA790307 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5154839 CA792045 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6866417 CA794099 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:2942943 AW460401 5' X. laevis.S Xenla 13LiCl whole organism NF stage 13
XL014i06 BJ031755 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL017o12 BJ032841 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL040i18 BJ037445 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL042l16 BJ038192 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL045g07 BJ038757 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL045h05 BJ038779 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL027e21 BJ041694 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032f04 BJ042636 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032k22 BJ042737 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7976977 DR725264 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
xl265k19 DC113455 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl306o17 DC125142 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl276b06 DC116418 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL201j09 BJ622606 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206i02 BJ623911 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL207h11 BJ624160 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL211b06 BJ625277 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL141p03 BJ093276 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL159a24 BJ612398 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL193h10 BJ620524 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL455f22ex BP687794 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk6i09ex DC057567 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0153G04 AW645600 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xlk148c07ex DC051138 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk154m17ex DC062459 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3200059 AW767368 5' X. laevis.S Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:5570945 BQ736912 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6880163 CB180803 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL059o10 BJ058607 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL073n24 BJ061728 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL107c04 BJ068584 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL051o20 BJ069149 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060m07 BJ058849 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085d07 BJ066120 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6875690 CB200577 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3402645 BG020477 3' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL455f22ex BP723162 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk6i09ex DC024151 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL107c04 BJ090204 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085d07 BJ083445 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL434h08ex BP716986 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk148c07ex DC017801 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk154m17ex DC028943 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6875690 CB564781 3' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL060m07 BJ077360 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL059o10 BJ077109 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL073n24 BJ079902 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL040i18 BJ052140 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL027e21 BJ050985 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15