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Summary Expression Phenotypes Gene Literature (182) GO Terms (14) Nucleotides (167) Proteins (85) Interactants (1199) Wiki
XB-GENEPAGE-486800

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pax2 - All

RefSeq mRNAs(15)
Models - Gene (27)
Models - mRNA (35)
mRNAs (24)
ESTs (31)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
NM_001044423 NM_001044423.1 paired box protein Pax-2 1142 bp NP_001037888 X. tropicalis
NM_001086361 NM_001086361.1 paired box protein Pax-2-A 2121 bp NP_001079830 X. laevis.L
XM_018224275 XM_018224275.2 paired box protein Pax-2-A isoform X1 5693 bp XP_018079764 X. laevis.L
XM_018224276 XM_018224276.2 paired box protein Pax-2-A isoform X2 5690 bp XP_018079765 X. laevis.L
XM_018224277 XM_018224277.2 paired box protein Pax-2-A isoform X3 5710 bp XP_018079766 X. laevis.L
XM_018224278 XM_018224278.2 paired box protein Pax-2-A isoform X4 5594 bp XP_018079767 X. laevis.L
XM_018224279 XM_018224279.2 paired box protein Pax-2-A isoform X5 5574 bp XP_018079768 X. laevis.L
XM_018224280 XM_018224280.2 paired box protein Pax-2-A isoform X6 5612 bp XP_018079769 X. laevis.L
XM_018224281 XM_018224281.2 paired box protein Pax-2-A isoform X7 5481 bp XP_018079770 X. laevis.L
XM_018224282 XM_018224282.2 paired box protein Pax-2-A isoform X8 5382 bp XP_018079771 X. laevis.L
XM_018224283 XM_018224283.2 paired box protein Pax-2-A isoform X10 5400 bp XP_018079772 X. laevis.L
XM_018224284 XM_018224284.2 paired box protein Pax-2-A isoform X11 5398 bp XP_018079773 X. laevis.L
XM_018224285 XM_018224285.2 paired box protein Pax-2-A isoform X12 5380 bp XP_018079774 X. laevis.L
XM_018224286 XM_018224286.2 paired box protein Pax-2-A isoform X13 5282 bp XP_018079775 X. laevis.L
XM_041568361 XM_041568361.1 XP_041424295.1 paired box protein Pax-2-A isoform X9 5157 bp XP_041424295 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g32869 X. laevis.S
NCBI 10.1 XBXL10_1g30625 X. laevis.L
NCBI 10.0 XBXT10g016619 X. tropicalis
Xenbase 9.2 gene36752 X. laevis.L
JGI 9.1 Xelaev18034870m.g X. laevis.L
Xenbase 9.1 gene22882 X. tropicalis
JGI 7.2 Xelaev16019441m.g X. laevis.L
JGI 7.2 Xelaev16002418m.g X. laevis.S
JGI 7.1 Xetro.G00810 X. tropicalis
JGI 6.0 XeXenL6RMv10010800m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014206 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2040033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2040007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_204000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_204000034 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_204000008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_204000002 X. tropicalis
JGI 4.1 e_gw1.204.54.1 X. tropicalis
JGI 4.1 e_gw1.204.55.1 X. tropicalis
JGI 4.1 e_gw1.204.56.1 X. tropicalis
JGI 4.1 gw1.204.54.1 X. tropicalis
JGI 4.1 gw1.204.56.1 X. tropicalis
JGI 4.1 gw1.204.55.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2040015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2040054 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2040055 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2040056 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA57690 X. laevis.L
NCBI 10.1 XBmRNA62063 X. laevis.S
NCBI 10.0 mRNA082215 X. tropicalis
Xenbase 9.2 rna77209 X. laevis.L
JGI 9.1 Xelaev18034870m X. laevis.L
Xenbase 9.1 rna46123 X. tropicalis
JGI 7.2 Xelaev16002418m X. laevis.S
JGI 7.2 Xelaev16019441m X. laevis.L
JGI 7.1 Xetro.G00810.1 X. tropicalis
JGI 7.1 Xetro.G00810.3 X. tropicalis
JGI 7.1 Xetro.G00810.2 X. tropicalis
JGI 6.0 XeXenL6RMv10010800m X. laevis.L
JGI 4.1 estExt_FilteredModels1.C_2040015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2040054 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2040055 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2040056 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_204000034 X. tropicalis
JGI 4.1 e_gw1.204.54.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_204000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_204000003 X. tropicalis
JGI 4.1 gw1.204.54.1 X. tropicalis
JGI 4.1 gw1.204.55.1 X. tropicalis
JGI 4.1 gw1.204.56.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_204000008 X. tropicalis
JGI 4.1 e_gw1.204.55.1 X. tropicalis
JGI 4.1 e_gw1.204.56.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031058 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031059 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031060 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031061 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031062 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031063 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031065 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2040033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2040007 X. tropicalis

mRNAs from cDNA libraries (24)

Clone Accession Species Library Anatomy Stage
pax2-HAR114 CR760264 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001044423 X. tropicalis
pBS.5* AJ000667 X. laevis.L
pBS.30* AJ000669 X. laevis.L
IMAGE:5571307 BC055960 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086361 X. laevis.L
XM_018224275 X. laevis.L
XM_018224276 X. laevis.L
XM_018224277 X. laevis.L
XM_018224278 X. laevis.L
XM_018224279 X. laevis.L
XM_018224280 X. laevis.L
XM_018224281 X. laevis.L
XM_018224282 X. laevis.L
XM_018224283 X. laevis.L
XM_018224284 X. laevis.L
XM_018224285 X. laevis.L
XM_018224286 X. laevis.L
XM_041568361 X. laevis.L
HD.PA4 Y10119 X. laevis.L
HD.PA10 Y10121 X. laevis.L
pBS.4 Y10122 X. laevis.L
pBS.32 Y10123 X. laevis.L
AF027769 X. laevis.S

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
pax2-HAR114 AL673599 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA059f13 BX744594 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7588372 CX309889 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas058k14 AL682261 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas131c14 AL969279 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8859926 EL846492 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8856774 EL820086 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA027p14 CR572322 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7544874 CX487027 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544874 CX487026 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas131c14 BX758078 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
pax2-HAR114 BX686274 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8856774 EL820087 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA059f13 BX744595 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7588372 CX309888 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8859926 EL846493 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGp998K098639 BX844596 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL462b19ex BP690615 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL520c13ex BP707226 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL493e21ex BP708042 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3549440 BG578182 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:5543325 BQ732369 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5571307 BQ737395 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998A2212244 BX850031 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL065f14 BJ060291 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3549440 BG554169 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL493e21ex BP739999 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL520c13ex BP739539 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL066n15 BJ079010 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065f14 BJ078513 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3549440 BG554535 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26