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Summary Expression Phenotypes Gene Literature (67) GO Terms (96) Nucleotides (270) Proteins (58) Interactants (843) Wiki
XB-GENEPAGE-485062

Show:     All X. tropicalis X. laevis

Nucleotide sequences for gata6 - All

RefSeq mRNAs(7)
Models - Gene (31)
Models - mRNA (34)
mRNAs (14)
ESTs (153)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_204091 NM_204091.1 transcription factor GATA-6 3287 bp NP_989422 X. tropicalis
XM_012964475 XM_012964475.3 transcription factor GATA-6 isoform X1 4248 bp XP_012819929 X. tropicalis
NM_001090256 NM_001090256.1 GATA-binding factor 6-B 3720 bp NP_001083725 X. laevis.L
XM_041565346 XM_041565346.1 XP_041421280.1 GATA-binding factor 6-B isoform X1 3598 bp XP_041421280 X. laevis.L
XM_041565347 XM_041565347.1 XP_041421281.1 GATA-binding factor 6-B isoform X2 4142 bp XP_041421281 X. laevis.L
NM_001087983 NM_001087983.1 GATA-binding factor 6-A 4183 bp NP_001081452 X. laevis.S
XM_018268614 XM_018268614.2 GATA-binding factor 6-A isoform X1 4181 bp XP_018124103 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g27842 X. laevis.L
NCBI 10.1 XBXL10_1g29489 X. laevis.S
NCBI 10.0 XBXT10g017030 X. tropicalis
ENSEMBL 10.0 gata6 X. tropicalis
Xenbase 9.2 gene43400 X. laevis.L
Xenbase 9.2 gene18030 X. laevis.S
JGI 9.1 Xelaev18031904m.g X. laevis.L
JGI 9.1 Xelaev18033648m.g X. laevis.S
Xenbase 9.1 gene1309 X. tropicalis
ENSEMBL 9.1 gata6 X. tropicalis
JGI 7.2 Xelaev16076085m.g X. laevis.L
JGI 7.2 Xelaev16039656m.g X. laevis.S
JGI 7.1 Xetro.F00583 X. tropicalis
JGI 6.0 XeXenL6RMv10030799m.g X. laevis.L
JGI 6.0 XeXenL6RMv10030799m.g X. laevis.S
JGI 6.0 XeXenL6RMv10034119m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000003144 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_840050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840150 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840148 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_840031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000051 X. tropicalis
JGI 4.1 gw1.84.148.1 X. tropicalis
JGI 4.1 gw1.84.147.1 X. tropicalis
JGI 4.1 e_gw1.84.150.1 X. tropicalis
JGI 4.1 e_gw1.84.148.1 X. tropicalis
JGI 4.1 e_gw1.84.147.1 X. tropicalis
JGI 4.1 gw1.84.150.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000052 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_840010 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_84000010 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA52293 X. laevis.L
NCBI 10.1 XBmRNA55485 X. laevis.S
ENSEMBL 10.0 ENSXETT00000006823 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112277 X. tropicalis
NCBI 10.0 mRNA084405 X. tropicalis
Xenbase 9.2 rna52696 X. laevis.S
Xenbase 9.2 rna86781 X. laevis.L
ENSEMBL 9.1 ENSXETT00000006823 X. tropicalis
JGI 9.1 Xelaev18031904m X. laevis.L
Xenbase 9.1 rna4196 X. tropicalis
JGI 9.1 Xelaev18033648m X. laevis.S
JGI 7.2 Xelaev16076085m X. laevis.L
JGI 7.2 Xelaev16039656m X. laevis.S
JGI 7.1 Xetro.F00583.1 X. tropicalis
JGI 7.1 Xetro.F00583.3 X. tropicalis
JGI 7.1 Xetro.F00583.2 X. tropicalis
JGI 6.0 XeXenL6RMv10030799m X. laevis.L
JGI 6.0 XeXenL6RMv10034119m X. laevis.S
JGI 6.0 XeXenL6RMv10030799m X. laevis.S
JGI 4.1 gw1.84.150.1 X. tropicalis
JGI 4.1 e_gw1.84.148.1 X. tropicalis
JGI 4.1 e_gw1.84.150.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006823 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_840010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_840050 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_840031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840148 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840150 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_84000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000051 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000052 X. tropicalis
JGI 4.1 gw1.84.147.1 X. tropicalis
JGI 4.1 gw1.84.148.1 X. tropicalis
JGI 4.1 e_gw1.84.147.1 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
tNeu122b04 AY260735 X. tropicalis
TNeu122b04 CT030595 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_204091 X. tropicalis
XM_012964475 X. tropicalis
AY395755 X. laevis.L
IMAGE:6865584 BC082349 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001090256 X. laevis.L
XM_041565346 X. laevis.L
XM_041565347 X. laevis.L
Y08865 X. laevis.L
IMAGE:3403174 BC076718 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001087983 X. laevis.S
U45454 X. laevis.S
XM_018268614 X. laevis.S

ESTs (153)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA038b16 BX720150 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA071l16 CR426870 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6977179 CF223893 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7546350 CX499646 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548554 CX490710 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
gata6-HAR455 CX473128 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541083 CX462564 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540534 CX462426 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538255 CX447684 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537992 CX447516 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537568 CX446590 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533895 CX427438 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577788 CX424117 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu002l09 AL640303 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu026b14 AL644308 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu045o02 AL659399 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049a24 AL662370 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu051l03 AL677614 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089j18 AL778990 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073g10 AL781900 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064c12 AL783742 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu137p21 AL785917 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103l17 AL790875 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122b04 AL797310 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu101a21 AL805853 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7719574 CX983218 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719194 CX982548 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711825 CX968790 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7706527 CX958135 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703021 CX938670 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7687670 CX910020 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687810 CX909994 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO2421 CX932600 5' X. tropicalis NIH_XGC_tropTe5 testis frog
gata6-HAR111 BQ395911 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7693798 CX921658 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5383878 BQ396239 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7608013 CX408494 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8957310 EL652801 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7597979 CX387027 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620268 CX347970 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA061l20 BX731124 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA063d18 BX721886 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas069n09 AL683606 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas068m21 AL683701 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135d14 AL958097 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130l11 AL965327 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8949125 EG655027 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7719992 CX983817 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
st74m08 DC185155 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7608013 CX408493 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4462012 BG885303 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
rst74m08 DC155011 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu051l03 BX687735 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073g10 BX688253 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103l17 BX690607 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089j18 BX691547 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122b04 BX702296 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
gata6-HAR111 BQ395910 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5383878 BQ396238 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas068m21 BX750469 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135d14 BX758683 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130l11 BX760873 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577788 CX424116 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533895 CX427437 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537568 CX446589 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537992 CX447515 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538255 CX447683 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540534 CX462425 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
gata6-HAR455 CX473127 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548554 CX490709 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546350 CX499645 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6977179 CF223892 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA071l16 CR426871 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA063d18 BX721887 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA061l20 BX731125 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7620268 CX347969 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7687810 CX909993 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687670 CX910019 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693798 CX921657 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7703021 CX938669 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706527 CX958134 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7711825 CX968789 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719194 CX982547 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719574 CX983217 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719992 CX983816 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGp998J2214197 BX853472 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xlk139g21ex DC048300 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6633409 BU908060 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL088d17 BJ066792 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL155l07 BJ096946 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl337c15 DC134118 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL107g24 BJ068682 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6630838 BU905905 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL177j11 BJ616621 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8530695 EB483947 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL157e21 BJ612019 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4782986 BM260938 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL153g23 BJ096295 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8824323 EG575887 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62