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Summary Expression Phenotypes Gene Literature (117) GO Terms (12) Nucleotides (141) Proteins (57) Interactants (613) Wiki
XB-GENEPAGE-484854

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for gli3 - All

RefSeq mRNAs(13)
Models - Gene (30)
Models - mRNA (31)
mRNAs (15)
ESTs (34)

RefSeq mRNAs (13)

Accession Version Protein Name Length Protein Species
XM_004915351 XM_004915351.4 transcriptional activator GLI3 isoform X1 6985 bp XP_004915408 X. tropicalis
XM_004915350 XM_004915350.4 transcriptional activator GLI3 isoform X1 6798 bp XP_004915407 X. tropicalis
XM_012965492 XM_012965492.3 transcriptional activator GLI3 isoform X2 6384 bp XP_012820946 X. tropicalis
XM_018266317 XM_018266317.2 zinc finger protein GLI3 isoform X1 6944 bp XP_018121806 X. laevis.L
XM_018266318 XM_018266318.2 zinc finger protein GLI3 isoform X1 6777 bp XP_018121807 X. laevis.L
XM_018269355 XM_018269355.2 zinc finger protein GLI3-like isoform X1 6846 bp XP_018124844 X. laevis.S
XM_018269356 XM_018269356.2 zinc finger protein GLI3-like isoform X1 6597 bp XP_018124845 X. laevis.S
XM_018269357 XM_018269357.2 zinc finger protein GLI3-like isoform X1 6698 bp XP_018124846 X. laevis.S
XM_018269358 XM_018269358.2 zinc finger protein GLI3-like isoform X2 6844 bp XP_018124847 X. laevis.S
XM_018269360 XM_018269360.2 zinc finger protein GLI3-like isoform X3 6037 bp XP_018124849 X. laevis.S
NM_001087971 NM_001087971.1 zinc finger protein GLI3 6695 bp NP_001081440 X. laevis.L
XM_041567576 XM_041567576.1 XP_041423510.1 zinc finger protein GLI3-like isoform X3 6114 bp XP_041423510 X. laevis.S
XM_041565306 XM_041565306.1 XP_041421240.1 zinc finger protein GLI3 isoform X2 7287 bp XP_041421240 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g017684 X. tropicalis
NCBI 10.1 XBXL10_1g27309 X. laevis.L
NCBI 10.1 XBXL10_1g29127 X. laevis.S
ENSEMBL 10.0 gli3 X. tropicalis
JGI 9.1 Xelaev18031191m.g X. laevis.L
JGI 9.1 Xelaev18033248m.g X. laevis.S
Xenbase 9.1 gene25892 X. tropicalis
Xenbase 9.2 gene14342 X. laevis.L
Xenbase 9.2 gene6341 X. laevis.S
ENSEMBL 9.1 gli3 X. tropicalis
JGI 8.0 Xetrov14026609m.g X. tropicalis
JGI 7.1 Xetro.F01109 X. tropicalis
JGI 7.2 Xelaev16059677m.g X. laevis.L
JGI 6.0 XeXenL6RMv10027536m.g X. laevis.L
JGI 6.0 XeXenL6RMv10053129m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001856 X. tropicalis
JGI 4.1 estExt_Genewise1.C_570024 X. tropicalis
JGI 4.1 e_gw1.57.127.1 X. tropicalis
JGI 4.1 e_gw1.57.145.1 X. tropicalis
JGI 4.1 e_gw1.57.24.1 X. tropicalis
JGI 4.1 gw1.57.127.1 X. tropicalis
JGI 4.1 gw1.57.145.1 X. tropicalis
JGI 4.1 gw1.57.24.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_570006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_570127 X. tropicalis
JGI 4.1 estExt_Genewise1.C_570145 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_570011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_570003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_57000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_57000003 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA087279 X. tropicalis
NCBI 10.1 XBmRNA51161 X. laevis.L
NCBI 10.1 XBmRNA54762 X. laevis.S
ENSEMBL 10.0 ENSXETT00000105972 X. tropicalis
ENSEMBL 10.0 ENSXETT00000003920 X. tropicalis
JGI 9.1 Xelaev18031191m X. laevis.L
JGI 9.1 Xelaev18033248m X. laevis.S
Xenbase 9.1 rna51035 X. tropicalis
Xenbase 9.2 rna41774 X. laevis.L
Xenbase 9.2 rna18552 X. laevis.S
ENSEMBL 9.1 ENSXETT00000003920 X. tropicalis
JGI 8.0 Xetrov14026609m X. tropicalis
JGI 7.1 Xetro.F01109.1 X. tropicalis
JGI 7.2 Xelaev16059677m X. laevis.L
JGI 6.0 XeXenL6RMv10027536m X. laevis.L
JGI 6.0 XeXenL6RMv10053129m X. laevis.L
JGI 4.1 estExt_Genewise1.C_570024 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003920 X. tropicalis
JGI 4.1 e_gw1.57.127.1 X. tropicalis
JGI 4.1 e_gw1.57.145.1 X. tropicalis
JGI 4.1 e_gw1.57.24.1 X. tropicalis
JGI 4.1 gw1.57.127.1 X. tropicalis
JGI 4.1 gw1.57.145.1 X. tropicalis
JGI 4.1 gw1.57.24.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_570006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_570127 X. tropicalis
JGI 4.1 estExt_Genewise1.C_570145 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_570011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_570003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_57000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_57000003 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
TNeu004l12 CT025185 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012965492 X. tropicalis
XM_004915350 X. tropicalis
XM_004915351 X. tropicalis
U42461 X. laevis.L
NM_001087971 X. laevis.L
XM_018269360 X. laevis.S
XM_018269358 X. laevis.S
XM_018269357 X. laevis.S
XM_018269356 X. laevis.S
XM_018269355 X. laevis.S
XM_018266318 X. laevis.L
XM_018266317 X. laevis.L
XM_041565306 X. laevis.L
XM_041567576 X. laevis.S

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA040p22 CR446129 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7627298 CX381275 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786203 CX317162 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7529632 CX426642 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7636893 DR902880 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7569035 CX457507 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535458 CX476277 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5379184 BQ522961 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu074k22 AL781844 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA015f01 BX713858 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA052i20 BX733418 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7786203 CX317161 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA040p22 CR446130 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7627298 CX381274 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636893 CX406947 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7529632 CX426641 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535458 CX476276 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569035 CX457506 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5379184 BQ522960 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XL210b09 BJ624957 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998C0810561 BX854954 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL474l16ex BP694511 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488g10ex BP699672 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4202143 BG234572 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3580862 BG656592 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:4681279 BU152706 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6940648 CD099793 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL074e23 BJ061871 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054p06 BJ069905 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060k22 BJ077331 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074e23 BJ080042 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL210b09 BJ641451 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL488g10ex BP732554 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3580862 BG552388 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30