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Summary Expression Phenotypes Gene Literature (577) GO Terms (106) Nucleotides (552) Proteins (48) Interactants (2509) Wiki
XB-GENEPAGE-484552

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sox2 - All

RefSeq mRNAs(3)
Models - Gene (32)
Models - mRNA (32)
mRNAs (19)
ESTs (438)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_213704 NM_213704.3 transcription factor Sox-2 2238 bp NP_998869 X. tropicalis
NM_001088222 NM_001088222.1 transcription factor Sox-2 1190 bp NP_001081691 X. laevis.L
XM_041564856 XM_041564856.1 XP_041420790.1 transcription factor Sox-2 3442 bp XP_041420790 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g23955 X. laevis.L
NCBI 10.0 XBXT10g004990 X. tropicalis
NCBI 10.1 XBXL10_1g25814 X. laevis.S
ENSEMBL 10.0 sox2 X. tropicalis
Xenbase 9.2 gene41682 X. laevis.L
Xenbase 9.2 gene37454 X. laevis.S
JGI 9.1 Xelaev18002672m.g X. laevis.L
Xenbase 9.1 gene1910 X. tropicalis
ENSEMBL 9.1 sox2 X. tropicalis
JGI 8.0 Xetrov14022289m.g X. tropicalis
JGI 7.1 Xetro.E00206 X. tropicalis
JGI 6.0 XeXenL6RMv10008524m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000026292 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2450026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2450007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_245000025 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_245000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_245000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_245000007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_245000005 X. tropicalis
JGI 4.1 e_gw1.245.61.1 X. tropicalis
JGI 4.1 e_gw1.245.62.1 X. tropicalis
JGI 4.1 e_gw1.245.63.1 X. tropicalis
JGI 4.1 gw1.245.61.1 X. tropicalis
JGI 4.1 gw1.245.62.1 X. tropicalis
JGI 4.1 gw1.245.63.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2450012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2450061 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2450062 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2450063 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2450005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2450025 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA48276 X. laevis.S
NCBI 10.1 XBmRNA44805 X. laevis.L
ENSEMBL 10.0 ENSXETT00000077539 X. tropicalis
NCBI 10.0 mRNA024736 X. tropicalis
Xenbase 9.2 rna78181 X. laevis.S
Xenbase 9.2 rna84196 X. laevis.L
JGI 9.1 Xelaev18002672m X. laevis.L
ENSEMBL 9.1 ENSXETT00000077539 X. tropicalis
Xenbase 9.1 rna6251 X. tropicalis
JGI 8.0 Xetrov14022289m X. tropicalis
JGI 7.1 Xetro.E00206.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008524m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_245000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_245000025 X. tropicalis
JGI 4.1 e_gw1.245.61.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_245000007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_245000005 X. tropicalis
JGI 4.1 gw1.245.61.1 X. tropicalis
JGI 4.1 gw1.245.62.1 X. tropicalis
JGI 4.1 gw1.245.63.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_245000026 X. tropicalis
JGI 4.1 e_gw1.245.62.1 X. tropicalis
JGI 4.1 e_gw1.245.63.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004031 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2450005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2450025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2450026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2450007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2450012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2450061 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2450062 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2450063 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
AL782141 X. tropicalis
IMAGE:5308902 BC067975 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
CR566396 X. tropicalis
CR760314 X. tropicalis
NM_213704 X. tropicalis
AF005476 X. laevis.L
AF022928 X. laevis.L
NM_001088222 X. laevis.L
IMAGE:6865551 BC076717 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
GQ292559 X. laevis.S
XM_041564856 X. laevis.S
XR_005961610 X. laevis.S
XR_005961611 X. laevis.S
XR_005961612 X. laevis.S
XR_005961613 X. laevis.S
XR_005961614 X. laevis.S
XR_005961615 X. laevis.S
XR_005961616 X. laevis.S
XR_005961617 X. laevis.S

ESTs (438)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069g04 BX683105 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr13N01 CN097853 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA065d08 CR444447 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st22m24 DC169614 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs11K17 CN075964 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st23l13 DC169886 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7513145 CX741909 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
st24g11 DC170089 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA009g08 CR588235 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7514433 CX744314 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TTbA047g19 CR415592 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7515669 CX746482 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
st18p21 DC168266 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas015d04 AL631961 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas022b13 AL633183 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G11d09 AL639023 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G12b01 AL639075 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047a20 AL646108 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027a04 AL647307 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027j17 AL655466 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas053d06 AL678253 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
sox2-HAR75 AL680500 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas058l15 AL682083 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas058g18 AL682240 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102p14 AL958471 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130c22 AL959240 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114n11 AL959985 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142l22 AL963109 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123j08 AL972007 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA024e06 CR420635 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA022a18 CR587244 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA070l02 CR426634 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA044b01 CR586083 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA044k21 CR427727 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA048i10 CR584111 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7670841 CX878265 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA049a08 CR429721 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7669357 CX875617 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA025a12 BX723124 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7664190 CX848820 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA044e12 CR430347 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7663854 CX848146 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA075h08 CR430704 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6984699 CF150864 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
THdA036j20 CR582297 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7639877 CX385556 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA032h05 CR433180 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7616598 CX361238 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st12i01 DC166336 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7596423 CX336600 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA043k04 CR434925 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7515698 CX746658 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TTbA076o05 CR438468 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA036j02 CR582283 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA074e21 CR439002 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA034m07 BX722854 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA052m17 CR580183 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA031i10 CR442001 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA042f07 BX741546 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA080p15 CR442816 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA043k20 CR578253 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA074a10 CR444036 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st24l13 DC170165 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29f05 DC171474 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29o09 DC171649 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30f05 DC172058 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st34p02 DC173290 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st36e19 DC173670 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3c03 DC173904 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3i01 DC174001 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7530521 CX419764 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528029 CX424626 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st5g19 DC174537 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7534338 CX428485 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st6c15 DC174763 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7532533 CX433274 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st6l14 DC174926 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7523844 CX437982 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st6o08 DC174979 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7574541 CX441089 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st7f08 DC175106 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7541324 CX448011 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st39h21 DC176564 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7544109 CX460006 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st44d17 DC177709 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7563855 CX473656 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st45d17 DC177938 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7564431 CX474978 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st47a18 DC178331 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7565062 CX481349 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st62n24 DC182135 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7566460 CX483663 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st66b13 DC182951 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7549148 CX484191 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st67b06 DC183207 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7546079 CX488706 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st67k08 DC183351 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7554767 CX501446 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st68h02 DC183552 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5