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Summary Expression Phenotypes Gene Literature (95) GO Terms (20) Nucleotides (139) Proteins (100) Interactants (864) Wiki
XB-GENEPAGE-483692

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pax8 - All

RefSeq mRNAs(19)
Models - Gene (26)
Models - mRNA (34)
mRNAs (24)
ESTs (10)

RefSeq mRNAs (19)

Accession Version Protein Name Length Protein Species
XM_012959276 XM_012959276.3 paired box protein Pax-8 isoform X1 4182 bp XP_012814730 X. tropicalis
XM_012959277 XM_012959277.3 paired box protein Pax-8 isoform X1 4127 bp XP_012814731 X. tropicalis
XM_018092180 XM_018092180.2 paired box protein Pax-8 isoform X2 4178 bp XP_017947669 X. tropicalis
XM_012959280 XM_012959280.3 paired box protein Pax-8 isoform X4 4131 bp XP_012814734 X. tropicalis
XM_012959281 XM_012959281.3 paired box protein Pax-8 isoform X5 4127 bp XP_012814735 X. tropicalis
XM_012959282 XM_012959282.3 paired box protein Pax-8 isoform X6 3994 bp XP_012814736 X. tropicalis
NM_001079301 NM_001079301.2 paired box protein Pax-8 3849 bp NP_001072769 X. tropicalis
XM_031898084 XM_031898084.1 XP_031753944.1 paired box protein Pax-8 isoform X3 4181 bp XP_031753944 X. tropicalis
XM_031898085 XM_031898085.1 XP_031753945.1 paired box protein Pax-8 isoform X7 3989 bp XP_031753945 X. tropicalis
XM_031898086 XM_031898086.1 XP_031753946.1 paired box protein Pax-8 isoform X8 4126 bp XP_031753946 X. tropicalis
XM_018250806 XM_018250806.2 paired box protein Pax-8 isoform X5 3814 bp XP_018106295 X. laevis.L
XM_018250807 XM_018250807.2 paired box protein Pax-8 isoform X6 3811 bp XP_018106296 X. laevis.L
XM_018255128 XM_018255128.2 paired box protein Pax-8 isoform X1 3419 bp XP_018110617 X. laevis.S
XM_018255129 XM_018255129.2 paired box protein Pax-8 isoform X2 3415 bp XP_018110618 X. laevis.S
NM_001088472 NM_001088472.1 paired box protein Pax-8 1398 bp NP_001081941 X. laevis.L
XM_018250798 XM_018250798.2 paired box protein Pax-8 isoform X1 4000 bp XP_018106287 X. laevis.L
XM_018250799 XM_018250799.2 paired box protein Pax-8 isoform X2 3997 bp XP_018106288 X. laevis.L
XM_018250804 XM_018250804.2 paired box protein Pax-8 isoform X3 3947 bp XP_018106293 X. laevis.L
XM_018250805 XM_018250805.2 paired box protein Pax-8 isoform X4 3944 bp XP_018106294 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g019893 X. tropicalis
NCBI 10.1 XBXL10_1g13559 X. laevis.L
NCBI 10.1 XBXL10_1g15418 X. laevis.S
ENSEMBL 10.0 pax8 X. tropicalis
JGI 9.1 Xelaev18018610m.g X. laevis.L
JGI 9.1 Xelaev18020288m.g X. laevis.S
Xenbase 9.1 gene20737 X. tropicalis
Xenbase 9.2 gene13317 X. laevis.L
Xenbase 9.2 gene50749 X. laevis.S
ENSEMBL 9.1 pax8 X. tropicalis
JGI 8.0 Xetrov14012699m.g X. tropicalis
JGI 7.1 Xetro.C00454 X. tropicalis
JGI 7.2 Xelaev16033154m.g X. laevis.L
JGI 6.0 XeXenL6RMv10021958m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001272 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_30000056 X. tropicalis
JGI 4.1 e_gw1.30.235.1 X. tropicalis
JGI 4.1 e_gw1.30.352.1 X. tropicalis
JGI 4.1 e_gw1.30.436.1 X. tropicalis
JGI 4.1 gw1.30.235.1 X. tropicalis
JGI 4.1 gw1.30.352.1 X. tropicalis
JGI 4.1 gw1.30.436.1 X. tropicalis
JGI 4.1 AST_CF223949 X. tropicalis
JGI 4.1 AST_fgenesh1_pg.C_scaffold_30000056 X. tropicalis
JGI 4.1 PAU_fgenesh1_pg.C_scaffold_30000056 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_30000019 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.0 mRNA098196 X. tropicalis
NCBI 10.1 XBmRNA25754 X. laevis.L
NCBI 10.1 XBmRNA28819 X. laevis.S
ENSEMBL 10.0 ENSXETT00000093057 X. tropicalis
ENSEMBL 10.0 ENSXETT00000002730 X. tropicalis
JGI 9.1 Xelaev18018610m X. laevis.L
JGI 9.1 Xelaev18020288m X. laevis.S
Xenbase 9.1 rna42733 X. tropicalis
Xenbase 9.2 rna38763 X. laevis.L
Xenbase 9.2 rna97382 X. laevis.S
ENSEMBL 9.1 ENSXETT00000078472 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067755 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089000 X. tropicalis
ENSEMBL 9.1 ENSXETT00000002730 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093057 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096353 X. tropicalis
JGI 8.0 Xetrov14012699m X. tropicalis
JGI 7.1 Xetro.C00454.2 X. tropicalis
JGI 7.1 Xetro.C00454.1 X. tropicalis
JGI 7.1 Xetro.C00454.3 X. tropicalis
JGI 7.2 Xelaev16033154m X. laevis.L
JGI 6.0 XeXenL6RMv10021958m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_30000056 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002730 X. tropicalis
JGI 4.1 e_gw1.30.235.1 X. tropicalis
JGI 4.1 e_gw1.30.352.1 X. tropicalis
JGI 4.1 e_gw1.30.436.1 X. tropicalis
JGI 4.1 gw1.30.235.1 X. tropicalis
JGI 4.1 gw1.30.352.1 X. tropicalis
JGI 4.1 gw1.30.436.1 X. tropicalis
JGI 4.1 AST_CF223949 X. tropicalis
JGI 4.1 AST_fgenesh1_pg.C_scaffold_30000056 X. tropicalis
JGI 4.1 PAU_fgenesh1_pg.C_scaffold_30000056 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_30000019 X. tropicalis

mRNAs from cDNA libraries (24)

Clone Accession Species Library Anatomy Stage
pax8-HAR131 BC125805 X. tropicalis
IMAGE:7863442 BC125805 X. tropicalis
NM_001079301 X. tropicalis
XM_012959282 X. tropicalis
XM_012959281 X. tropicalis
XM_012959280 X. tropicalis
XM_018092180 X. tropicalis
XM_012959277 X. tropicalis
XM_012959276 X. tropicalis
CF223949 X. tropicalis
XM_031898086 X. tropicalis
XM_031898085 X. tropicalis
XM_031898084 X. tropicalis
AF179301 X. laevis.L
BS.KLPax8.1 AJ010504 X. laevis.L
NM_001088472 X. laevis.L
XM_018255129 X. laevis.S
XM_018255128 X. laevis.S
XM_018250807 X. laevis.L
XM_018250806 X. laevis.L
XM_018250805 X. laevis.L
XM_018250804 X. laevis.L
XM_018250799 X. laevis.L
XM_018250798 X. laevis.L

ESTs (10)

Clone Accession 5'/3' Species Library Anatomy Stage
pax8-HAR214 CF223949 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu107b22 AL790647 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
pax8-HAR214 CF223950 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7560104 CX516138 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL044l19 BJ040198 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL045d19 BJ038704 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL092m10 BJ071042 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL092m10 BJ088372 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL044l19 BJ054585 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL045d19 BJ050669 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15