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Summary Expression Phenotypes Gene Literature (206) GO Terms (66) Nucleotides (149) Proteins (55) Interactants (1378) Wiki
XB-GENEPAGE-482481

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for lhx1 - All

RefSeq mRNAs(5)
Models - Gene (29)
Models - mRNA (33)
mRNAs (10)
ESTs (60)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001100228 NM_001100228.1 LIM/homeobox protein Lhx1 2649 bp NP_001093698 X. tropicalis
NM_001090659 NM_001090659.1 LIM/homeobox protein Lhx1 1367 bp NP_001084128 X. laevis.L
XM_018249410 XM_018249410.2 LIM/homeobox protein Lhx1-like isoform X1 3174 bp XP_018104899 X. laevis.S
XM_018249411 XM_018249411.2 LIM/homeobox protein Lhx1-like isoform X2 3162 bp XP_018104900 X. laevis.S
XM_018249412 XM_018249412.1 LIM/homeobox protein Lhx1-like isoform X3 2572 bp XP_018104901 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g015504 X. tropicalis
NCBI 10.1 XBXL10_1g6986 X. laevis.L
NCBI 10.1 XBXL10_1g9874 X. laevis.S
ENSEMBL 10.0 lhx1 X. tropicalis
JGI 9.1 Xelaev18012165m.g X. laevis.L
JGI 9.1 Xelaev18015014m.g X. laevis.S
Xenbase 9.1 gene7165 X. tropicalis
Xenbase 9.2 gene16543 X. laevis.L
Xenbase 9.2 gene1335 X. laevis.S
ENSEMBL 9.1 lhx1 X. tropicalis
JGI 8.0 Xetrov14007735m.g X. tropicalis
JGI 7.1 Xetro.B01380 X. tropicalis
JGI 7.2 Xelaev16044871m.g X. laevis.L
JGI 6.0 XeXenL6RMv10013339m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008963 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5160010 X. tropicalis
JGI 4.1 e_gw1.516.3.1 X. tropicalis
JGI 4.1 e_gw1.516.36.1 X. tropicalis
JGI 4.1 e_gw1.516.41.1 X. tropicalis
JGI 4.1 gw1.516.3.1 X. tropicalis
JGI 4.1 gw1.516.36.1 X. tropicalis
JGI 4.1 gw1.516.41.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5160007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5160006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_516000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_516000007 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA076717 X. tropicalis
NCBI 10.1 XBmRNA13077 X. laevis.L
NCBI 10.1 XBmRNA18445 X. laevis.S
ENSEMBL 10.0 ENSXETT00000122652 X. tropicalis
ENSEMBL 10.0 ENSXETT00000019633 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065703 X. tropicalis
JGI 9.1 Xelaev18012165m X. laevis.L
JGI 9.1 Xelaev18015014m X. laevis.S
Xenbase 9.1 rna23133 X. tropicalis
Xenbase 9.2 rna48312 X. laevis.L
Xenbase 9.2 rna3897 X. laevis.S
ENSEMBL 9.1 ENSXETT00000019633 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065703 X. tropicalis
JGI 8.0 Xetrov14007735m X. tropicalis
JGI 7.1 Xetro.B01380.2 X. tropicalis
JGI 7.1 Xetro.B01380.1 X. tropicalis
JGI 7.2 Xelaev16044871m X. laevis.L
JGI 6.0 XeXenL6RMv10013339m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_5160010 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019633 X. tropicalis
JGI 4.1 e_gw1.516.3.1 X. tropicalis
JGI 4.1 e_gw1.516.36.1 X. tropicalis
JGI 4.1 e_gw1.516.41.1 X. tropicalis
JGI 4.1 gw1.516.3.1 X. tropicalis
JGI 4.1 gw1.516.36.1 X. tropicalis
JGI 4.1 gw1.516.41.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5160007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5160006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_516000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_516000007 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7630858 BC135731 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001100228 X. tropicalis
X63889 X. laevis.L
NM_001090659 X. laevis.L
IMAGE:9040974 BC169340 X. laevis.L
IMAGE:9040972 BC169338 X. laevis.L
GQ485551 X. laevis.L
XM_018249412 X. laevis.S
XM_018249411 X. laevis.S
XM_018249410 X. laevis.S

ESTs (60)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7630858 CX396370 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787103 CX329267 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8098 CX942216 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xtbs17K19 CN079873 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7524484 CX439436 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520858 CX468847 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551403 CX510617 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552269 CX494294 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6987893 CF220773 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu090k22 AL800573 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA055a04 BX719183 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas028k15 AL652706 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114o24 AL965783 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114o24 BX755690 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8098 CX942215 3' X. tropicalis NIH_XGC_tropTe5 testis frog
rst13h24 DC136565 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs17K19 CN079872 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7630858 CX396369 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7524484 CX439435 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520858 CX468846 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552269 CX494293 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551403 CX510616 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7787103 DR904582 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu090k22 BX695359 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xlk106m23ex DC037807 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl287a01 DC119453 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl268d03 DC114200 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk164a10ex DC065379 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk155a07ex DC062525 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk126l20ex DC044189 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk75l16ex DC059564 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7296468 CO390110 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
xlk128o11ex DC044897 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk161e12ex DC064502 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk3d20ex DC053681 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk73g11ex DC058829 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk60b24ex DC035668 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL174b05 BJ615674 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL199o03 BJ622124 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL200h13 BJ622296 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:7296209 CO385838 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL141g02 BJ093085 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL173i07 BJ097155 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk75l16ex DC026128 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk164a10ex DC031849 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk155a07ex DC029012 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl287a01 DC084705 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl332i08 DC096840 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk126l20ex DC011050 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk73g11ex DC025402 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk106m23ex DC004896 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk3d20ex DC020307 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7296468 CO554633 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
rxlk60b24ex DC002808 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL173i07 BJ100138 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL174b05 BJ632297 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL199o03 BJ638810 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL200h13 BJ638972 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:7296020 CO388323 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6880817 CB562197 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage