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Summary Expression Phenotypes Gene Literature (206) GO Terms (66) Nucleotides (149) Proteins (55) Interactants (1377) Wiki
XB-GENEPAGE-482481

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for lhx1 - All

RefSeq mRNAs(2)
Models - Gene (29)
Models - mRNA (33)
mRNAs (10)
ESTs (60)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001100228 NM_001100228.1 LIM/homeobox protein Lhx1 2649 bp NP_001093698 X. tropicalis
NM_001090659 NM_001090659.1 LIM/homeobox protein Lhx1 1367 bp NP_001084128 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g015504 X. tropicalis
NCBI 10.1 XBXL10_1g6986 X. laevis.L
NCBI 10.1 XBXL10_1g9874 X. laevis.S
ENSEMBL 10.0 lhx1 X. tropicalis
JGI 9.1 Xelaev18012165m.g X. laevis.L
JGI 9.1 Xelaev18015014m.g X. laevis.S
Xenbase 9.1 gene7165 X. tropicalis
Xenbase 9.2 gene16543 X. laevis.L
Xenbase 9.2 gene1335 X. laevis.S
ENSEMBL 9.1 lhx1 X. tropicalis
JGI 8.0 Xetrov14007735m.g X. tropicalis
JGI 7.1 Xetro.B01380 X. tropicalis
JGI 7.2 Xelaev16044871m.g X. laevis.L
JGI 6.0 XeXenL6RMv10013339m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008963 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5160010 X. tropicalis
JGI 4.1 e_gw1.516.3.1 X. tropicalis
JGI 4.1 e_gw1.516.36.1 X. tropicalis
JGI 4.1 e_gw1.516.41.1 X. tropicalis
JGI 4.1 gw1.516.3.1 X. tropicalis
JGI 4.1 gw1.516.36.1 X. tropicalis
JGI 4.1 gw1.516.41.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5160007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5160006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_516000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_516000007 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA076717 X. tropicalis
NCBI 10.1 XBmRNA13077 X. laevis.L
NCBI 10.1 XBmRNA18445 X. laevis.S
ENSEMBL 10.0 ENSXETT00000122652 X. tropicalis
ENSEMBL 10.0 ENSXETT00000019633 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065703 X. tropicalis
JGI 9.1 Xelaev18012165m X. laevis.L
JGI 9.1 Xelaev18015014m X. laevis.S
Xenbase 9.1 rna23133 X. tropicalis
Xenbase 9.2 rna48312 X. laevis.L
Xenbase 9.2 rna3897 X. laevis.S
ENSEMBL 9.1 ENSXETT00000019633 X. tropicalis
ENSEMBL 9.1 ENSXETT00000065703 X. tropicalis
JGI 8.0 Xetrov14007735m X. tropicalis
JGI 7.1 Xetro.B01380.2 X. tropicalis
JGI 7.1 Xetro.B01380.1 X. tropicalis
JGI 7.2 Xelaev16044871m X. laevis.L
JGI 6.0 XeXenL6RMv10013339m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_5160010 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019633 X. tropicalis
JGI 4.1 e_gw1.516.3.1 X. tropicalis
JGI 4.1 e_gw1.516.36.1 X. tropicalis
JGI 4.1 e_gw1.516.41.1 X. tropicalis
JGI 4.1 gw1.516.3.1 X. tropicalis
JGI 4.1 gw1.516.36.1 X. tropicalis
JGI 4.1 gw1.516.41.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5160007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5160041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5160006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_516000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_516000007 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7630858 BC135731 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001100228 X. tropicalis
X63889 X. laevis.L
NM_001090659 X. laevis.L
IMAGE:9040974 BC169340 X. laevis.L
IMAGE:9040972 BC169338 X. laevis.L
GQ485551 X. laevis.L
XM_018249412 X. laevis.S
XM_018249411 X. laevis.S
XM_018249410 X. laevis.S

ESTs (60)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs17K19 CN079873 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO8098 CX942216 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7787103 CX329267 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630858 CX396370 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7552269 CX494294 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551403 CX510617 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520858 CX468847 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524484 CX439436 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas114o24 AL965783 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas028k15 AL652706 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA055a04 BX719183 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu090k22 AL800573 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6987893 CF220773 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xtbs17K19 CN079872 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst13h24 DC136565 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO8098 CX942215 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7787103 DR904582 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7551403 CX510616 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552269 CX494293 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520858 CX468846 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524484 CX439435 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7630858 CX396369 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas114o24 BX755690 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu090k22 BX695359 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl268d03 DC114200 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl287a01 DC119453 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk106m23ex DC037807