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Summary Expression Phenotypes Gene Literature (44) GO Terms (11) Nucleotides (112) Proteins (49) Interactants (551) Wiki
XB-GENEPAGE-480864

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sox8 - All

RefSeq mRNAs(1)
Models - Gene (37)
Models - mRNA (37)
mRNAs (6)
ESTs (21)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001090495 transcription factor Sox-8 1941 bp NP_001083964 X. laevis.L

Models - Gene (37)

Source Version Model Species
NCBI 10.0 XBXT10g018702 X. tropicalis
NCBI 10.1 XBXL10_1g41386 X. laevis.L
NCBI 10.1 XBXL10_1g44027 X. laevis.S
ENSEMBL 10.0 sox8 X. tropicalis
JGI 9.1 Xelaev18045519m.g X. laevis.L
JGI 9.1 Xelaev18047768m.g X. laevis.S
Xenbase 9.1 gene6181 X. tropicalis
Xenbase 9.2 gene6967 X. laevis.L
Xenbase 9.2 gene5376 X. laevis.S
ENSEMBL 9.1 SOX8 X. tropicalis
JGI 8.0 Xetrov14038786m.g X. tropicalis
JGI 7.1 Xetro.I01525 X. tropicalis
JGI 7.2 Xelaev16028320m.g X. laevis.L
JGI 6.0 XeXenL6RMv10015236m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005746 X. tropicalis
JGI 4.1 C_scaffold_23000001 X. tropicalis
JGI 4.1 e_gw1.23.11.1 X. tropicalis
JGI 4.1 e_gw1.23.168.1 X. tropicalis
JGI 4.1 e_gw1.23.169.1 X. tropicalis
JGI 4.1 e_gw1.23.182.1 X. tropicalis
JGI 4.1 e_gw1.23.37.1 X. tropicalis
JGI 4.1 e_gw1.23.39.1 X. tropicalis
JGI 4.1 gw1.23.11.1 X. tropicalis
JGI 4.1 gw1.23.168.1 X. tropicalis
JGI 4.1 gw1.23.169.1 X. tropicalis
JGI 4.1 gw1.23.182.1 X. tropicalis
JGI 4.1 gw1.23.37.1 X. tropicalis
JGI 4.1 gw1.23.39.1 X. tropicalis
JGI 4.1 TIM_estExt_FilteredModels1.C_230004 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_230004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230168 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230169 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_230004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_230001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_23000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_23000001 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.0 mRNA092390 X. tropicalis
NCBI 10.1 XBmRNA78105 X. laevis.L
NCBI 10.1 XBmRNA82830 X. laevis.S
ENSEMBL 10.0 ENSXETT00000104208 X. tropicalis
JGI 9.1 Xelaev18045519m X. laevis.L
JGI 9.1 Xelaev18047768m X. laevis.S
Xenbase 9.1 rna19966 X. tropicalis
Xenbase 9.2 rna20344 X. laevis.L
Xenbase 9.2 rna15764 X. laevis.S
ENSEMBL 9.1 ENSXETT00000104208 X. tropicalis
JGI 8.0 Xetrov14038786m X. tropicalis
JGI 7.1 Xetro.I01525.1 X. tropicalis
JGI 7.2 Xelaev16028320m X. laevis.L
JGI 6.0 XeXenL6RMv10015236m X. laevis.L
JGI 4.1 C_scaffold_23000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012681 X. tropicalis
JGI 4.1 e_gw1.23.11.1 X. tropicalis
JGI 4.1 e_gw1.23.168.1 X. tropicalis
JGI 4.1 e_gw1.23.169.1 X. tropicalis
JGI 4.1 e_gw1.23.182.1 X. tropicalis
JGI 4.1 e_gw1.23.37.1 X. tropicalis
JGI 4.1 e_gw1.23.39.1 X. tropicalis
JGI 4.1 gw1.23.11.1 X. tropicalis
JGI 4.1 gw1.23.168.1 X. tropicalis
JGI 4.1 gw1.23.169.1 X. tropicalis
JGI 4.1 gw1.23.182.1 X. tropicalis
JGI 4.1 gw1.23.37.1 X. tropicalis
JGI 4.1 gw1.23.39.1 X. tropicalis
JGI 4.1 TIM_estExt_FilteredModels1.C_230004 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_230004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230168 X. tropicalis
JGI 4.1 estExt_Genewise1.C_230169 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_230004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_230001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_23000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_23000001 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002932269 X. tropicalis
AY324658 X. laevis.L
NM_001090495 X. laevis.L
IMAGE:9041159 BC169525 X. laevis.L
IMAGE:9041155 BC169521 X. laevis.L
XM_018239299 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069n24 BX683228 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8961253 EL661531 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8937053 EL639338 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st55g05 DC180313 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7593073 CX326546 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA052e10 BX733378 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA052e09 BX725778 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA003g06 BX706951 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu127h17 AL803769 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099h19 AL791798 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu105k06 AL786367 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069n24 AL781679 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7629612 CX369652 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593073 CX326545 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA003g06 BX706952 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu127h17 BX697673 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099h19 BX692150 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu105k06 BX691071 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7980859 DR730013 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982582 DR720342 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL143l17 BJ097918 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5