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Summary Expression Phenotypes Gene Literature (11) GO Terms (4) Nucleotides (114) Proteins (42) Interactants (79) Wiki
XB-GENEPAGE-478461

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hoxd3 - Xenopus tropicalis

RefSeq mRNAs(6)
Models - Gene (15)
Models - mRNA (15)
mRNAs (7)
ESTs (14)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002935688 XM_002935688.5 homeobox protein Hox-D3 3725 bp XP_002935734 X. tropicalis
XM_004917732 XM_004917732.3 homeobox protein Hox-D3 3259 bp XP_004917789 X. tropicalis
XM_004917733 XM_004917733.3 homeobox protein Hox-D3 3555 bp XP_004917790 X. tropicalis
XM_004917729 XM_004917729.4 homeobox protein Hox-D3 3528 bp XP_004917786 X. tropicalis
XM_004917730 XM_004917730.4 homeobox protein Hox-D3 5741 bp XP_004917787 X. tropicalis
XM_004917731 XM_004917731.4 homeobox protein Hox-D3 5088 bp XP_004917788 X. tropicalis

Models - Gene (15)

Source Version Model Species
NCBI 10.0 XBXT10g003364 X. tropicalis
ENSEMBL 10.0 hoxd3 X. tropicalis
Xenbase 9.1 gene1521 X. tropicalis
ENSEMBL 9.1 castor2 X. tropicalis
JGI 8.0 Xetrov14037303m.g X. tropicalis
JGI 7.1 Xetro.I00365 X. tropicalis
ENSEMBL 4.1 ENSXETG00000001800 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000016 X. tropicalis
JGI 4.1 gw1.163.13.1 X. tropicalis
JGI 4.1 gw1.163.137.1 X. tropicalis
JGI 4.1 gw1.163.204.1 X. tropicalis
JGI 4.1 e_gw1.163.13.1 X. tropicalis
JGI 4.1 e_gw1.163.137.1 X. tropicalis
JGI 4.1 e_gw1.163.204.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000005 X. tropicalis

mRNAs based on gene models(15)

Source Version Model Species
NCBI 10.0 mRNA017073 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099847 X. tropicalis
Xenbase 9.1 rna4956 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099847 X. tropicalis
JGI 8.0 Xetrov14037303m X. tropicalis
JGI 7.1 Xetro.I00365.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000016 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003766 X. tropicalis
JGI 4.1 e_gw1.163.13.1 X. tropicalis
JGI 4.1 e_gw1.163.137.1 X. tropicalis
JGI 4.1 e_gw1.163.204.1 X. tropicalis
JGI 4.1 gw1.163.13.1 X. tropicalis
JGI 4.1 gw1.163.137.1 X. tropicalis
JGI 4.1 gw1.163.204.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000005 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
TTbA025a21 CU075344 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XM_002935688 X. tropicalis
XM_004917731 X. tropicalis
XM_004917730 X. tropicalis
XM_004917729 X. tropicalis
XM_004917733 X. tropicalis
XM_004917732 X. tropicalis

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7790596 CX324358 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636511 CX406635 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619622 CX347518 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617791 CX362305 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603180 CX394695 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA035c12 CR426130 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025a21 CR418468 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027a02 CR413478 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7790596 CX324357 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619622 DR898078 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617791 DR897559 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603180 DR893242 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636511 CX406634 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA035c12 CR426131 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30