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Summary Expression Phenotypes Gene Literature (11) GO Terms (4) Nucleotides (114) Proteins (42) Interactants (79) Wiki
XB-GENEPAGE-478461

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hoxd3 - All

RefSeq mRNAs(11)
Models - Gene (23)
Models - mRNA (23)
mRNAs (13)
ESTs (25)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
XM_004917732 XM_004917732.3 homeobox protein Hox-D3 3259 bp XP_004917789 X. tropicalis
XM_004917733 XM_004917733.3 homeobox protein Hox-D3 3555 bp XP_004917790 X. tropicalis
XM_004917729 XM_004917729.4 homeobox protein Hox-D3 3528 bp XP_004917786 X. tropicalis
XM_004917730 XM_004917730.4 homeobox protein Hox-D3 5741 bp XP_004917787 X. tropicalis
XM_004917731 XM_004917731.4 homeobox protein Hox-D3 5088 bp XP_004917788 X. tropicalis
XM_002935688 XM_002935688.5 homeobox protein Hox-D3 3725 bp XP_002935734 X. tropicalis
NM_001097687 NM_001097687.1 homeobox protein Hox-D3 1820 bp NP_001091156 X. laevis.L
XM_041578031 XM_041578031.1 XP_041433965.1 homeobox protein Hox-D3-like 3725 bp XP_041433965 X. laevis.S
XM_018238881 XM_018238881.2 homeobox protein Hox-D3-like 3255 bp XP_018094370 X. laevis.S
XM_018238882 XM_018238882.2 homeobox protein Hox-D3-like 3303 bp XP_018094371 X. laevis.S
XM_018238884 XM_018238884.2 homeobox protein Hox-D3-like 3292 bp XP_018094373 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g003364 X. tropicalis
NCBI 10.1 XBXL10_1g40726 X. laevis.L
NCBI 10.1 XBXL10_1g43525 X. laevis.S
ENSEMBL 10.0 hoxd3 X. tropicalis
JGI 9.1 Xelaev18044736m.g X. laevis.L
JGI 9.1 Xelaev18047202m.g X. laevis.S
Xenbase 9.1 gene1521 X. tropicalis
Xenbase 9.2 gene9356 X. laevis.L
Xenbase 9.2 gene10855 X. laevis.S
ENSEMBL 9.1 castor2 X. tropicalis
JGI 8.0 Xetrov14037303m.g X. tropicalis
JGI 7.1 Xetro.I00365 X. tropicalis
JGI 7.2 Xelaev16053386m.g X. laevis.L
JGI 6.0 XeXenL6RMv10024614m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001800 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_163000016 X. tropicalis
JGI 4.1 gw1.163.13.1 X. tropicalis
JGI 4.1 gw1.163.137.1 X. tropicalis
JGI 4.1 gw1.163.204.1 X. tropicalis
JGI 4.1 e_gw1.163.13.1 X. tropicalis
JGI 4.1 e_gw1.163.137.1 X. tropicalis
JGI 4.1 e_gw1.163.204.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000005 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.0 mRNA017073 X. tropicalis
NCBI 10.1 XBmRNA76694 X. laevis.L
NCBI 10.1 XBmRNA81892 X. laevis.S
ENSEMBL 10.0 ENSXETT00000099847 X. tropicalis
JGI 9.1 Xelaev18044736m X. laevis.L
JGI 9.1 Xelaev18047202m X. laevis.S
Xenbase 9.1 rna4956 X. tropicalis
Xenbase 9.2 rna27214 X. laevis.L
Xenbase 9.2 rna31549 X. laevis.S
ENSEMBL 9.1 ENSXETT00000099847 X. tropicalis
JGI 8.0 Xetrov14037303m X. tropicalis
JGI 7.1 Xetro.I00365.1 X. tropicalis
JGI 7.2 Xelaev16053386m X. laevis.L
JGI 6.0 XeXenL6RMv10024614m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_163000016 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003766 X. tropicalis
JGI 4.1 e_gw1.163.13.1 X. tropicalis
JGI 4.1 e_gw1.163.137.1 X. tropicalis
JGI 4.1 e_gw1.163.204.1 X. tropicalis
JGI 4.1 gw1.163.13.1 X. tropicalis
JGI 4.1 gw1.163.137.1 X. tropicalis
JGI 4.1 gw1.163.204.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_163000005 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
TTbA025a21 CU075344 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XM_002935688 X. tropicalis
XM_004917731 X. tropicalis
XM_004917730 X. tropicalis
XM_004917729 X. tropicalis
XM_004917733 X. tropicalis
XM_004917732 X. tropicalis
IMAGE:8533049 BC129640 X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
NM_001097687 X. laevis.L
XM_018238884 X. laevis.S
XM_018238882 X. laevis.S
XM_018238881 X. laevis.S
XM_041578031 X. laevis.S

ESTs (25)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7603180 CX394695 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617791 CX362305 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619622 CX347518 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636511 CX406635 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790596 CX324358 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA027a02 CR413478 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025a21 CR418468 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA035c12 CR426130 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7617791 DR897559 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619622 DR898078 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790596 CX324357 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA035c12 CR426131 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7636511 CX406634 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603180 DR893242 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4684054 BQ733318 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6938505 CD101556 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL013k19 BJ029834 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGp998O219346 BX844586 5' X. laevis.L Wellcome CRC pRN3 St13 17 whole organism NF stage 13 to NF stage 17
IMAGE:8533049 EB470897 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:4084844 BG893193 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL026d07 BJ049459 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL013k19 BJ044548 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL103e12 BJ075669 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8533049 EC277751 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:4084844 BI446890 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21