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Summary Expression Phenotypes Gene Literature (0) GO Terms (7) Nucleotides (187) Proteins (60) Interactants (57) Wiki
XB-GENEPAGE-1217543

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ltn1 - All

RefSeq mRNAs(1)
Models - Gene (36)
Models - mRNA (48)
mRNAs (6)
ESTs (62)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001079277 E3 ubiquitin-protein ligase listerin 6283 bp NP_001072745 X. tropicalis

Models - Gene (36)

Source Version Model Species
NCBI 10.0 XBXT10g003852 X. tropicalis
NCBI 10.1 XBXL10_1g6302 X. laevis.L
ENSEMBL 10.0 ltn1 X. tropicalis
JGI 9.1 Xelaev18011529m.g X. laevis.L
Xenbase 9.1 gene5022 X. tropicalis
Xenbase 9.2 gene3287 X. laevis.L
ENSEMBL 9.1 ltn1 X. tropicalis
JGI 8.0 Xetrov14006462m.g X. tropicalis
JGI 7.1 Xetro.B02156 X. tropicalis
JGI 7.2 Xelaev16067579m.g X. laevis.L
JGI 6.0 XeXenL6RMv10045053m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020250 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4510006 X. tropicalis
JGI 4.1 e_gw1.451.20.1 X. tropicalis
JGI 4.1 e_gw1.451.36.1 X. tropicalis
JGI 4.1 e_gw1.451.4.1 X. tropicalis
JGI 4.1 e_gw1.451.41.1 X. tropicalis
JGI 4.1 e_gw1.451.45.1 X. tropicalis
JGI 4.1 e_gw1.451.78.1 X. tropicalis
JGI 4.1 e_gw1.451.79.1 X. tropicalis
JGI 4.1 gw1.451.20.1 X. tropicalis
JGI 4.1 gw1.451.36.1 X. tropicalis
JGI 4.1 gw1.451.4.1 X. tropicalis
JGI 4.1 gw1.451.41.1 X. tropicalis
JGI 4.1 gw1.451.45.1 X. tropicalis
JGI 4.1 gw1.451.78.1 X. tropicalis
JGI 4.1 gw1.451.79.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4510006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4510002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_451000006 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_451000002 X. tropicalis

mRNAs based on gene models(48)

Source Version Model Species
NCBI 10.0 mRNA019391 X. tropicalis
NCBI 10.1 XBmRNA11834 X. laevis.L
ENSEMBL 10.0 ENSXETT00000064235 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082194 X. tropicalis
ENSEMBL 10.0 ENSXETT00000043688 X. tropicalis
JGI 9.1 Xelaev18011529m X. laevis.L
Xenbase 9.1 rna16361 X. tropicalis
Xenbase 9.2 rna9527 X. laevis.L
ENSEMBL 9.1 ENSXETT00000043688 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082194 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086422 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092513 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064235 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080547 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089707 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100860 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086367 X. tropicalis
JGI 8.0 Xetrov14006462m X. tropicalis
JGI 7.1 Xetro.B02156.3 X. tropicalis
JGI 7.1 Xetro.B02156.2 X. tropicalis
JGI 7.1 Xetro.B02156.1 X. tropicalis
JGI 7.2 Xelaev16067579m X. laevis.L
JGI 6.0 XeXenL6RMv10045053m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_4510006 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043688 X. tropicalis
JGI 4.1 e_gw1.451.20.1 X. tropicalis
JGI 4.1 e_gw1.451.36.1 X. tropicalis
JGI 4.1 e_gw1.451.4.1 X. tropicalis
JGI 4.1 e_gw1.451.41.1 X. tropicalis
JGI 4.1 e_gw1.451.45.1 X. tropicalis
JGI 4.1 e_gw1.451.78.1 X. tropicalis
JGI 4.1 e_gw1.451.79.1 X. tropicalis
JGI 4.1 gw1.451.20.1 X. tropicalis
JGI 4.1 gw1.451.36.1 X. tropicalis
JGI 4.1 gw1.451.4.1 X. tropicalis
JGI 4.1 gw1.451.41.1 X. tropicalis
JGI 4.1 gw1.451.45.1 X. tropicalis
JGI 4.1 gw1.451.78.1 X. tropicalis
JGI 4.1 gw1.451.79.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4510006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4510045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4510002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_451000006 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_451000002 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
NM_001079277 X. tropicalis
IMAGE:7793946 BC125737 X. tropicalis
XM_012957313 X. tropicalis
IMAGE:6640963 BC094181 X. laevis.L
IMAGE:8542577 BC129518 X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XM_018245959 X. laevis.L

ESTs (62)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8892580 EL853209 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8882799 EL851344 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8921927 EL836076 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8964329 EL661662 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8958514 EL660121 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
st38e19 DC176230 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st2d02 DC171731 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st3d02 DC173923 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT13840 CX322418 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633682 CX375215 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7575844 CX431330 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537599 CX446481 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532068 CX433052 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531756 CX421923 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7733783 DN018221 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7716419 CX977047 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710602 CX966560 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7693005 CX919696 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691635 CX917027 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7793180 CX846891 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656571 CX827683 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650519 CX811109 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648428 CX808204 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7526230 CX443529 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA072n06 CR436510 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA024k24 CR420713 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu138e08 AL799177 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu116e21 AL794099 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas059h12 AL682826 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu037g02 AL657910 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8882799 EL851345 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst3d02 DC143668 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst2d02 DC141524 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7710602 CX966559 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7691635 CX917026 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7733783 DN018220 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7710255 CX966140 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7693005 CX919695 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7656571 CX827682 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7648428 CX808203 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7537599 CX446480 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532068 CX433051 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575844 CX431329 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531756 CX421922 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA072n06 CR436511 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xl226d04 DC101503 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl298p08 DC122712 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl253i12 DC109830 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl228d04 DC102125 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8542577 EB473792 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8528957 EB462008 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8318540 DY551538 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7299748 CO386403 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL101h14 BJ074305 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106h22 BJ068356 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4785442 BI442542 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGE:3745727 BE680501 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl228d04 DC068059 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl226d04 DC067510 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl273b19 DC080691 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL106h22 BJ085615 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3743279 BE678432 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage