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Summary Expression Phenotypes Gene Literature (2) GO Terms (25) Nucleotides (142) Proteins (45) Interactants (175) Wiki
XB-GENEPAGE-1011236

Show:     All X. tropicalis X. laevis

Nucleotide sequences for efhc1 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (32)
mRNAs (7)
ESTs (52)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001008105 NM_001008105.1 EF-hand domain-containing protein 1 2027 bp NP_001008106 X. tropicalis
NM_001092940 NM_001092940.1 EF-hand domain (C-terminal) containing 1 L homeolog 1942 bp NP_001086409 X. laevis.L
XM_018261925 XM_018261925.2 EF-hand domain (C-terminal) containing 1 L homeolog isoform X1 2482 bp XP_018117414 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g24548 X. laevis.L
NCBI 10.0 XBXT10g007809 X. tropicalis
ENSEMBL 10.0 efhc1 X. tropicalis
Xenbase 9.2 gene8621 X. laevis.L
JGI 9.1 Xelaev18028224m.g X. laevis.L
Xenbase 9.1 gene32967 X. tropicalis
ENSEMBL 9.1 efhc1 X. tropicalis
ENSEMBL 9.1 agmo X. tropicalis
JGI 8.0 Xetrov14042572m.g X. tropicalis
JGI 7.2 Xelaev16068311m.g X. laevis.L
JGI 7.1 Xetro.K05145 X. tropicalis
JGI 6.0 XeXenL6RMv10022347m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000659 X. tropicalis
JGI 4.1 gw1.63.492.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630407 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630412 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630480 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630073 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000073 X. tropicalis
JGI 4.1 gw1.63.490.1 X. tropicalis
JGI 4.1 gw1.63.480.1 X. tropicalis
JGI 4.1 gw1.63.412.1 X. tropicalis
JGI 4.1 gw1.63.407.1 X. tropicalis
JGI 4.1 e_gw1.63.492.1 X. tropicalis
JGI 4.1 e_gw1.63.490.1 X. tropicalis
JGI 4.1 e_gw1.63.480.1 X. tropicalis
JGI 4.1 e_gw1.63.412.1 X. tropicalis
JGI 4.1 e_gw1.63.407.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_630071 X. tropicalis
JGI 4.1 C_scaffold_63000022 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA45895 X. laevis.L
ENSEMBL 10.0 ENSXETT00000001450 X. tropicalis
NCBI 10.0 mRNA038689 X. tropicalis
Xenbase 9.2 rna25098 X. laevis.L
ENSEMBL 9.1 ENSXETT00000071154 X. tropicalis
Xenbase 9.1 rna62271 X. tropicalis
JGI 9.1 Xelaev18028224m X. laevis.L
ENSEMBL 9.1 ENSXETT00000001450 X. tropicalis
ENSEMBL 9.1 ENSXETT00000011041 X. tropicalis
JGI 8.0 Xetrov14042572m X. tropicalis
JGI 7.2 Xelaev16068311m X. laevis.L
JGI 7.1 Xetro.K05145.2 X. tropicalis
JGI 7.1 Xetro.K05145.1 X. tropicalis
JGI 6.0 XeXenL6RMv10022347m X. laevis.L
JGI 4.1 gw1.63.412.1 X. tropicalis
JGI 4.1 gw1.63.480.1 X. tropicalis
JGI 4.1 gw1.63.490.1 X. tropicalis
JGI 4.1 gw1.63.492.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000073 X. tropicalis
JGI 4.1 e_gw1.63.407.1 X. tropicalis
JGI 4.1 e_gw1.63.412.1 X. tropicalis
JGI 4.1 e_gw1.63.480.1 X. tropicalis
JGI 4.1 e_gw1.63.490.1 X. tropicalis
JGI 4.1 e_gw1.63.492.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001450 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630073 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_630071 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630407 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630412 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630480 X. tropicalis
JGI 4.1 C_scaffold_63000022 X. tropicalis
JGI 4.1 gw1.63.407.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
AY823390 X. tropicalis
IMAGE:6986568 BC081308 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_001008105 X. tropicalis
AY823391 X. laevis.L
IMAGE:7020334 BC075247 X. laevis.L
NM_001092940 X. laevis.L
XM_018261925 X. laevis.L

ESTs (52)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7541162 CX463077 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA003n12 BX705053 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA038g13 CR569217 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA010b20 CR414640 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st114o24 DC193228 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu072a19 AL780820 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8859442 EL824056 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO5115 CX936793 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7695376 CX924503 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7636696 DR902696 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629080 CX383391 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA034e10 BX745209 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas015l23 AL631291 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA073b13 BX733996 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA062a19 BX720680 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA062a17 BX720678 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6986568 CF221590 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7531219 CX420594 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8921708 EL836169 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TNeu072a19 BX688890 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst114o24 DC164513 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7531219 CX420593 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541162 CX463076 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA010b20 CR414641 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA038g13 CR569218 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA003n12 BX705054 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA073b13 BX733997 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034e10 BX745210 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7636696 DR902695 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7695376 CX924502 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO5115 CX936792 3' X. tropicalis NIH_XGC_tropTe5 testis frog
XL163c13 BJ613314 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL096i09 BJ072095 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8318757 DY548230 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL025l01 BJ033968 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8538962 EB478585 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:4785402 BI442536 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGE:3400008 BG161936 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL060d11 BJ058706 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL061f21 BJ059038 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3201484 AW766157 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
XL081c11 BJ064917 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8320812 DY547208 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL046m21 BJ040545 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL060d11 BJ077216 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL166c13 BJ630656 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL061f21 BJ077555 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL025l01 BJ049312 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL081c11 BJ082457 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3201484 AW767950 3' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
XL096i09 BJ089151 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL165f12 BJ630451 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5