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Summary Expression Phenotypes Gene Literature (2) GO Terms (5) Nucleotides (247) Proteins (65) Interactants (89) Wiki
XB-GENEPAGE-1010519

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trrap - All

Models - Gene (37)
Models - mRNA (48)
mRNAs (10)
ESTs (99)

Models - Gene (37)

Source Version Model Species
NCBI 10.0 XBXT10g018936 X. tropicalis
NCBI 10.1 XBXL10_1g43885 X. laevis.S
NCBI 10.1 XBXL10_1g41176 X. laevis.L
ENSEMBL 10.0 trrap X. tropicalis
JGI 9.1 Xelaev18047595m.g X. laevis.S
JGI 9.1 Xelaev18045289m.g X. laevis.L
Xenbase 9.1 gene5238 X. tropicalis
Xenbase 9.2 gene6577 X. laevis.S
Xenbase 9.2 gene35025 X. laevis.L
ENSEMBL 9.1 trrap X. tropicalis
JGI 7.1 Xetro.I01276 X. tropicalis
JGI 6.0 XeXenL6RMv10032965m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000020075 X. tropicalis
JGI 4.1 C_scaffold_14000006 X. tropicalis
JGI 4.1 gw1.14.196.1 X. tropicalis
JGI 4.1 gw1.14.3.1 X. tropicalis
JGI 4.1 gw1.14.338.1 X. tropicalis
JGI 4.1 gw1.14.339.1 X. tropicalis
JGI 4.1 gw1.14.52.1 X. tropicalis
JGI 4.1 gw1.14.53.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_140016 X. tropicalis
JGI 4.1 e_gw1.14.196.1 X. tropicalis
JGI 4.1 e_gw1.14.3.1 X. tropicalis
JGI 4.1 e_gw1.14.338.1 X. tropicalis
JGI 4.1 e_gw1.14.339.1 X. tropicalis
JGI 4.1 e_gw1.14.52.1 X. tropicalis
JGI 4.1 e_gw1.14.53.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140194 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140335 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140336 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_140041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_140004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_14000041 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_14000004 X. tropicalis

Models - mRNA (48)

Source Version Model Species
NCBI 10.0 mRNA093602 X. tropicalis
NCBI 10.1 XBmRNA77714 X. laevis.L
NCBI 10.1 XBmRNA82596 X. laevis.S
ENSEMBL 10.0 ENSXETT00000071968 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089112 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093241 X. tropicalis
JGI 9.1 Xelaev18045289m X. laevis.L
JGI 9.1 Xelaev18047595m X. laevis.S
Xenbase 9.1 rna17015 X. tropicalis
Xenbase 9.2 rna74791 X. laevis.L
Xenbase 9.2 rna19252 X. laevis.S
ENSEMBL 9.1 ENSXETT00000071968 X. tropicalis
ENSEMBL 9.1 ENSXETT00000043361 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093241 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074681 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089112 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087978 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072345 X. tropicalis
JGI 7.1 Xetro.I01276.1 X. tropicalis
JGI 7.1 Xetro.I01276.4 X. tropicalis
JGI 7.1 Xetro.I01276.2 X. tropicalis
JGI 7.1 Xetro.I01276.3 X. tropicalis
JGI 6.0 XeXenL6RMv10032965m X. laevis.S
JGI 4.1 C_scaffold_14000006 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043361 X. tropicalis
JGI 4.1 e_gw1.14.196.1 X. tropicalis
JGI 4.1 e_gw1.14.3.1 X. tropicalis
JGI 4.1 e_gw1.14.338.1 X. tropicalis
JGI 4.1 e_gw1.14.339.1 X. tropicalis
JGI 4.1 e_gw1.14.52.1 X. tropicalis
JGI 4.1 e_gw1.14.53.1 X. tropicalis
JGI 4.1 gw1.14.196.1 X. tropicalis
JGI 4.1 gw1.14.3.1 X. tropicalis
JGI 4.1 gw1.14.338.1 X. tropicalis
JGI 4.1 gw1.14.339.1 X. tropicalis
JGI 4.1 gw1.14.52.1 X. tropicalis
JGI 4.1 gw1.14.53.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_140016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140194 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140335 X. tropicalis
JGI 4.1 estExt_Genewise1.C_140336 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_140041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_140004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_14000041 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_14000004 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7685912 BC166349 X. tropicalis
XM_002931947 X. tropicalis
XM_012970817 X. tropicalis
XM_012970818 X. tropicalis
XM_018239166 X. laevis.S
XM_018239165 X. laevis.S
XM_041575847 X. laevis.L
XM_041575846 X. laevis.L
XM_041575844 X. laevis.L
XM_041575843 X. laevis.L

ESTs (99)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886728 EL844372 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8913374 EL825445 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855517 EL818044 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8868287 EL707864 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st14e13 DC166875 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st87i21 DC188328 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7632627 CX398244 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626956 CX380937 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616673 CX393252 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7547047 CX500830 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559999 CX515094 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7737371 DN024595 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720663 CX995450 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7687673 CX909685 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7663060 CX846245 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659829 CX839400 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650977 CX811948 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650685 CX811274 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650107 CX810575 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649963 CX810570 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649100 CX808893 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644868 CX801301 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642341 CX796986 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7526599 CX443667 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526183 CX443358 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523697 CX437631 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529971 CX426870 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586302 CX319780 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587540 CX313789 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA069c15 CR436306 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA003l24 CR410681 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas136h20 AL972750 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143c23 AL968640 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116p07 AL957313 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas138a24 AL958168 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA045l04 BX718796 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA003e18 BX706942 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu116g06 AL801337 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089d16 AL778957 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas057k09 AL674723 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu049k17 AL662078 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046a19 AL661995 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021n07 AL636255 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6999720 CF343581 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6999720 CF343580 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
L1G11a08 AL639000 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8859590 EL824078 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855517 EL818045 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8868287 EL707863 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst87i21 DC158220 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst14e13 DC136807 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7587540 CX313788 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663060 CX846244 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659829 CX839399 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7626956 DR899948 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559999 DR889447 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529971 DR888629 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7650977 CX811947 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649963 CX810569 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642341 CX796985 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7737371 DN024594 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720663 CX995449 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7687673 CX909684 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7650685 CX811273 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644868 CX801300 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7547047 CX500829 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523697 CX437630 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7632627 CX398243 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616673 CX393251 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA069c15 CR436307 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas136h20 BX761471 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas138a22 BX757668 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas143c23 BX757267 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas116p07 BX753130 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057k09 BX747337 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA045l04 BX718797 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA003e18 BX706943 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu116g06 BX701566 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089d16 BX693735 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:4463159 BG886061 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4440581 BG514989 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xl319k14 DC128873 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl323a13 DC129913 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl256e19 DC110654 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8319874 DY559044 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7978990 DR728210 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7980011 DR723360 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL420f19ex BP675907 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL208b14 BJ624319 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL085i02 BJ066225 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL033i03 BJ042994 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6637449 BU911464 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5542699 BQ736028 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4678415 BI477806 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3517390 BG348038 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
rxl323a13 DC094103 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL208b14 BJ640872 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL085i02 BJ083547 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4678415 BI445757 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage