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Summary Expression Phenotypes Gene Literature (10) GO Terms (12) Nucleotides (170) Proteins (64) Interactants (252) Wiki
XB-GENEPAGE-998658

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for chfr - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (25)
Models - mRNA (32)
mRNAs (4)
ESTs (33)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_204047 NM_204047.1 E3 ubiquitin-protein ligase CHFR 4846 bp NP_989378 X. tropicalis
XM_012958542 XM_012958542.3 E3 ubiquitin-protein ligase CHFR isoform X1 4940 bp XP_012813996 X. tropicalis
XM_012958547 XM_012958547.3 E3 ubiquitin-protein ligase CHFR isoform X1 4867 bp XP_012814001 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g010265 X. tropicalis
ENSEMBL 10.0 chfr X. tropicalis
Xenbase 9.1 gene2717 X. tropicalis
ENSEMBL 9.1 chfr X. tropicalis
JGI 8.0 Xetrov14001262m.g X. tropicalis
JGI 7.1 Xetro.A00780 X. tropicalis
ENSEMBL 4.1 ENSXETG00000024212 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120034 X. tropicalis
JGI 4.1 gw1.12.148.1 X. tropicalis
JGI 4.1 gw1.12.332.1 X. tropicalis
JGI 4.1 gw1.12.87.1 X. tropicalis
JGI 4.1 e_gw1.12.148.1 X. tropicalis
JGI 4.1 e_gw1.12.332.1 X. tropicalis
JGI 4.1 e_gw1.12.87.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120086 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120146 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120328 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_120003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_12000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000034 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000035 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000007 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.0 mRNA050765 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091844 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082845 X. tropicalis
Xenbase 9.1 rna9000 X. tropicalis
ENSEMBL 9.1 ENSXETT00000052239 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091844 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072536 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071075 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082845 X. tropicalis
JGI 8.0 Xetrov14001262m X. tropicalis
JGI 7.1 Xetro.A00780.3 X. tropicalis
JGI 7.1 Xetro.A00780.2 X. tropicalis
JGI 7.1 Xetro.A00780.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120034 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052239 X. tropicalis
JGI 4.1 e_gw1.12.148.1 X. tropicalis
JGI 4.1 e_gw1.12.332.1 X. tropicalis
JGI 4.1 e_gw1.12.87.1 X. tropicalis
JGI 4.1 gw1.12.148.1 X. tropicalis
JGI 4.1 gw1.12.332.1 X. tropicalis
JGI 4.1 gw1.12.87.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120086 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120146 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120328 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_120003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_12000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000034 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000035 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000007 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
NM_204047 X. tropicalis
IMAGE:5384094 BC064721 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XM_012958547 X. tropicalis
XM_012958542 X. tropicalis

ESTs (33)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8905615 EL797359 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8938272 EL641464 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st62h24 DC182035 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8949225 EG651679 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
XZT5015 CX413844 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8768 CX956570 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7790620 CX324231 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7548078 CX489736 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7604675 CX411576 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7540985 CX462549 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537252 CX446077 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7693369 CX920616 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7672488 CX881420 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7654334 CX823897 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7527525 CX445022 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA079c04 CR439373 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5384094 BQ396510 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8905615 EL797360 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8938272 EL641463 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst62h24 DC151774 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT5015 CX413843 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8768 CX956569 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693369 CX920615 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7654334 CX823896 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7527525 DR888563 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7672488 CX881419 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7548078 CX489735 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540985 CX462548 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537252 CX446076 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7604675 CX411575 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA017g10 CR568769 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA079c04 CR439374 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5384094 BQ396509 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19