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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (97) Proteins (42) Interactants (10) Wiki
XB-GENEPAGE-997847

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trim45 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (20)
Models - mRNA (20)
mRNAs (3)
ESTs (15)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001011026 NM_001011026.1 E3 ubiquitin-protein ligase TRIM45 2253 bp NP_001011026 X. tropicalis
XM_031895907 XM_031895907.1 XP_031751767.1 tripartite motif-containing protein 45 isoform X1 2262 bp XP_031751767 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g014622 X. tropicalis
ENSEMBL 10.0 trim45 X. tropicalis
Xenbase 9.1 gene1770 X. tropicalis
ENSEMBL 9.1 trim45 X. tropicalis
JGI 7.1 Xetro.K03904 X. tropicalis
ENSEMBL 4.1 ENSXETG00000017042 X. tropicalis
JGI 4.1 e_gw1.3272.11.1 X. tropicalis
JGI 4.1 e_gw1.3272.12.1 X. tropicalis
JGI 4.1 e_gw1.3272.8.1 X. tropicalis
JGI 4.1 gw1.3272.11.1 X. tropicalis
JGI 4.1 gw1.3272.12.1 X. tropicalis
JGI 4.1 gw1.3272.8.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_32720002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_32720008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_32720011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_32720012 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_32720001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_32720002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_3272000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3272000002 X. tropicalis

mRNAs based on gene models(20)

Source Version Model Species
NCBI 10.0 mRNA072282 X. tropicalis
ENSEMBL 10.0 ENSXETT00000037144 X. tropicalis
Xenbase 9.1 rna5795 X. tropicalis
ENSEMBL 9.1 ENSXETT00000037144 X. tropicalis
JGI 7.1 Xetro.K03904.1 X. tropicalis
JGI 4.1 e_gw1.3272.11.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037144 X. tropicalis
JGI 4.1 e_gw1.3272.12.1 X. tropicalis
JGI 4.1 e_gw1.3272.8.1 X. tropicalis
JGI 4.1 gw1.3272.11.1 X. tropicalis
JGI 4.1 gw1.3272.12.1 X. tropicalis
JGI 4.1 gw1.3272.8.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_32720002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_32720008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_32720011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_32720012 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_32720001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_32720002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_3272000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_3272000002 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001011026 X. tropicalis
IMAGE:6979709 BC082821 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_031895907 X. tropicalis

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8888696 EL847515 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8967227 EL659433 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
st8a04 DC175303 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st47h07 DC178430 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st102h21 DC191150 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8943191 EG653356 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
CAAO5196 CX936933 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu065a12 AL777715 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6979709 CF149402 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8888696 EL847516 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst47h07 DC148153 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst102h21 DC161169 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst8a04 DC144974 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO5196 CX936932 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu065a12 BX689566 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21