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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (190) Proteins (62) Interactants (23) Wiki
XB-GENEPAGE-995487

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for setd2 - All

RefSeq mRNAs(14)
Models - Gene (24)
Models - mRNA (39)
mRNAs (17)
ESTs (53)

RefSeq mRNAs (14)

Accession Version Protein Name Length Protein Species
XM_031903778 XM_031903778.1 XP_031759638.1 histone-lysine N-methyltransferase SETD2 isoform X2 10320 bp XP_031759638 X. tropicalis
XM_012964979 XM_012964979.3 histone-lysine N-methyltransferase SETD2 isoform X1 10322 bp XP_012820433 X. tropicalis
XM_041565742 XM_041565742.1 XP_041421676.1 histone-lysine N-methyltransferase SETD2 isoform X6 9510 bp XP_041421676 X. laevis.L
XM_041565743 XM_041565743.1 XP_041421677.1 histone-lysine N-methyltransferase SETD2 isoform X9 7503 bp XP_041421677 X. laevis.L
XM_041567323 XM_041567323.1 XP_041423257.1 histone-lysine N-methyltransferase SETD2 isoform X1 9790 bp XP_041423257 X. laevis.S
XM_041567324 XM_041567324.1 XP_041423258.1 histone-lysine N-methyltransferase SETD2 isoform X2 9787 bp XP_041423258 X. laevis.S
XM_041567325 XM_041567325.1 XP_041423259.1 histone-lysine N-methyltransferase SETD2 isoform X3 9766 bp XP_041423259 X. laevis.S
XM_018267021 XM_018267021.2 histone-lysine N-methyltransferase SETD2 isoform X5 10580 bp XP_018122510 X. laevis.L
XM_018267024 XM_018267024.2 histone-lysine N-methyltransferase SETD2 isoform X7 10556 bp XP_018122513 X. laevis.L
XM_018267025 XM_018267025.2 histone-lysine N-methyltransferase SETD2 isoform X8 10469 bp XP_018122514 X. laevis.L
XM_041565738 XM_041565738.1 XP_041421672.1 histone-lysine N-methyltransferase SETD2 isoform X1 9537 bp XP_041421672 X. laevis.L
XM_041565739 XM_041565739.1 XP_041421673.1 histone-lysine N-methyltransferase SETD2 isoform X2 9534 bp XP_041421673 X. laevis.L
XM_041565740 XM_041565740.1 XP_041421674.1 histone-lysine N-methyltransferase SETD2 isoform X3 9534 bp XP_041421674 X. laevis.L
XM_041565741 XM_041565741.1 XP_041421675.1 histone-lysine N-methyltransferase SETD2 isoform X4 10583 bp XP_041421675 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g013837 X. tropicalis
NCBI 10.1 XBXL10_1g26701 X. laevis.L
NCBI 10.1 XBXL10_1g28668 X. laevis.S
ENSEMBL 10.0 setd2 X. tropicalis
JGI 9.1 Xelaev18030546m.g X. laevis.L
JGI 9.1 Xelaev18032749m.g X. laevis.S
Xenbase 9.1 gene31494 X. tropicalis
Xenbase 9.2 gene46303 X. laevis.L
Xenbase 9.2 gene46143 X. laevis.S
ENSEMBL 9.1 setd2 X. tropicalis
JGI 7.1 Xetro.F01744 X. tropicalis
JGI 6.0 XeXenL6RMv10031975m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000023876 X. tropicalis
JGI 4.1 e_gw1.757.45.1 X. tropicalis
JGI 4.1 e_gw1.757.22.1 X. tropicalis
JGI 4.1 e_gw1.757.25.1 X. tropicalis
JGI 4.1 e_gw1.757.4.1 X. tropicalis
JGI 4.1 gw1.757.22.1 X. tropicalis
JGI 4.1 gw1.757.25.1 X. tropicalis
JGI 4.1 gw1.757.4.1 X. tropicalis
JGI 4.1 gw1.757.45.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7570007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7570003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_757000007 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.0 mRNA068433 X. tropicalis
NCBI 10.1 XBmRNA49911 X. laevis.L
NCBI 10.1 XBmRNA53872 X. laevis.S
ENSEMBL 10.0 ENSXETT00000068337 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121244 X. tropicalis
ENSEMBL 10.0 ENSXETT00000051463 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118401 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119580 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085023 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103581 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123517 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106311 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119892 X. tropicalis
JGI 9.1 Xelaev18030546m X. laevis.L
JGI 9.1 Xelaev18032749m X. laevis.S
Xenbase 9.1 rna59858 X. tropicalis
Xenbase 9.2 rna91001 X. laevis.L
Xenbase 9.2 rna90782 X. laevis.S
ENSEMBL 9.1 ENSXETT00000051463 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085023 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103581 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068337 X. tropicalis
JGI 7.1 Xetro.F01744.1 X. tropicalis
JGI 6.0 XeXenL6RMv10031975m X. laevis.L
JGI 4.1 e_gw1.757.45.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054641 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051463 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054640 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051464 X. tropicalis
JGI 4.1 e_gw1.757.22.1 X. tropicalis
JGI 4.1 e_gw1.757.25.1 X. tropicalis
JGI 4.1 e_gw1.757.4.1 X. tropicalis
JGI 4.1 gw1.757.22.1 X. tropicalis
JGI 4.1 gw1.757.25.1 X. tropicalis
JGI 4.1 gw1.757.4.1 X. tropicalis
JGI 4.1 gw1.757.45.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7570007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7570003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_757000007 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
TNeu143d18 CR760397 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012964979 X. tropicalis
XR_004223147 X. tropicalis
XM_031903778 X. tropicalis
XM_018267025 X. laevis.L
XM_018267024 X. laevis.L
XM_018267021 X. laevis.L
XR_005962159 X. laevis.S
XM_041567325 X. laevis.S
XM_041567324 X. laevis.S
XM_041567323 X. laevis.S
XM_041565743 X. laevis.L
XM_041565742 X. laevis.L
XM_041565741 X. laevis.L
XM_041565740 X. laevis.L
XM_041565739 X. laevis.L
XM_041565738 X. laevis.L

ESTs (53)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas036m08 AL651588 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7566241 CX483475 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534157 CX427900 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534429 CX428777 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7613892 CX389813 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7546307 CX499356 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7626725 CX380148 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st87c04 DC188221 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39b17 DC176473 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8891812 EL865004 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA050e22 CR449232 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA021d03 CR567152 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7622664 CX371600 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7644252 CX800672 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7654954 CX825295 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7688828 CX912207 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7571134 CX511972 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas083c13 AL965995 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6995105 CF239571 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7002846 CF374620 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
TNeu143d18 AL796175 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu121k02 AL799983 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA050e22 CR449233 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7622664 CX371599 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7654954 CX825294 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8532231 EB478518 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
xl280j23 DC117726 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl281j23 DC118002 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl242h03 DC106481 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl298n19 DC122685 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL201h07 BJ622572 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998L108640 BX846360 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:7298542 CO384628 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7975561 DR718573 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7979309 DR719709 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8535398 EB465319 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:8526644 EB475377 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
PBX0107F10 AW641554 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3549849 BG578544 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:6872609 CB197710 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL076a14 BJ063344 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL101f23 BJ074292 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0039B06 AW635851 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8532231 EC276268 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
rxl242h03 DC072129 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl280j23 DC083008 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl281j23 DC083281 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL428l09ex BP715127 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL474g19ex BP728591 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3549849 BG555287 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:6872609 CB563419 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL076a14 BJ081576 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL101f23 BJ091747 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25