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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (71) Proteins (48) Interactants (5) Wiki
XB-GENEPAGE-994187

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trpt1 - Xenopus tropicalis

RefSeq mRNAs(6)
Models - Gene (13)
Models - mRNA (21)
mRNAs (7)
ESTs (5)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
XM_002940227 XM_002940227.5 tRNA 2'-phosphotransferase 1 isoform X1 1418 bp XP_002940273 X. tropicalis
XM_031900649 XM_031900649.1 XP_031756509.1 tRNA 2'-phosphotransferase 1 isoform X2 1388 bp XP_031756509 X. tropicalis
XM_012962351 XM_012962351.3 tRNA 2'-phosphotransferase 1 isoform X1 1475 bp XP_012817805 X. tropicalis
XM_004913644 XM_004913644.4 tRNA 2'-phosphotransferase 1 isoform X1 1422 bp XP_004913701 X. tropicalis
XM_012962354 XM_012962354.3 tRNA 2'-phosphotransferase 1 isoform X1 1232 bp XP_012817808 X. tropicalis
XM_004913645 XM_004913645.4 tRNA 2'-phosphotransferase 1 isoform X1 1269 bp XP_004913702 X. tropicalis

Models - Gene (13)

Source Version Model Species
NCBI 10.0 XBXT10g010221 X. tropicalis
ENSEMBL 10.0 trpt1 X. tropicalis
Xenbase 9.1 gene25612 X. tropicalis
ENSEMBL 9.1 trpt1 X. tropicalis
JGI 7.1 Xetro.D00919 X. tropicalis
ENSEMBL 4.1 ENSXETG00000007196 X. tropicalis
JGI 4.1 e_gw1.585.64.1 X. tropicalis
JGI 4.1 e_gw1.585.25.1 X. tropicalis
JGI 4.1 e_gw1.585.37.1 X. tropicalis
JGI 4.1 gw1.585.25.1 X. tropicalis
JGI 4.1 gw1.585.37.1 X. tropicalis
JGI 4.1 gw1.585.64.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_585000007 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.0 mRNA050520 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112848 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114878 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118893 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108538 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082386 X. tropicalis
ENSEMBL 10.0 ENSXETT00000015639 X. tropicalis
Xenbase 9.1 rna50562 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082386 X. tropicalis
ENSEMBL 9.1 ENSXETT00000015639 X. tropicalis
JGI 7.1 Xetro.D00919.1 X. tropicalis
JGI 7.1 Xetro.D00919.2 X. tropicalis
JGI 4.1 e_gw1.585.64.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015638 X. tropicalis
ENSEMBL 4.1 ENSXETT00000015639 X. tropicalis
JGI 4.1 e_gw1.585.25.1 X. tropicalis
JGI 4.1 e_gw1.585.37.1 X. tropicalis
JGI 4.1 gw1.585.25.1 X. tropicalis
JGI 4.1 gw1.585.37.1 X. tropicalis
JGI 4.1 gw1.585.64.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_585000007 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:8859384 BC168833 X. tropicalis NICHD_XGC_tropTe1 testis frog
XM_002940227 X. tropicalis
XM_004913645 X. tropicalis
XM_012962354 X. tropicalis
XM_004913644 X. tropicalis
XM_012962351 X. tropicalis
XM_031900649 X. tropicalis

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8859384 EL824264 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7715364 CX975327 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8859384 EL824265 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7715364 CX975326 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas070a08 BX749683 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12