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Summary Expression Phenotypes Gene Literature (4) GO Terms (5) Nucleotides (177) Proteins (66) Interactants (132) Wiki
XB-GENEPAGE-993757

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for capn2 - All

RefSeq mRNAs(8)
Models - Gene (23)
Models - mRNA (37)
mRNAs (10)
ESTs (76)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_001005446 NM_001005446.1 calpain-2 catalytic subunit 2311 bp NP_001005446 X. tropicalis
XM_031901616 XM_031901616.1 XP_031757476.1 calpain-2 catalytic subunit isoform X1 2600 bp XP_031757476 X. tropicalis
XM_031901617 XM_031901617.1 XP_031757477.1 calpain-2 catalytic subunit isoform X2 2589 bp XP_031757477 X. tropicalis
XM_031901618 XM_031901618.1 XP_031757478.1 calpain-2 catalytic subunit isoform X3 2577 bp XP_031757478 X. tropicalis
XM_041562125 XM_041562125.1 XP_041418059.1 calpain 2 L homeolog isoform X1 2603 bp XP_041418059 X. laevis.L
XM_018264959 XM_018264959.2 calpain-2 catalytic subunit isoform X1 2577 bp XP_018120448 X. laevis.S
XM_018264960 XM_018264960.2 calpain-2 catalytic subunit isoform X2 2565 bp XP_018120449 X. laevis.S
NM_001090244 NM_001090244.1 calpain 2 L homeolog 3623 bp NP_001083713 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g016373 X. tropicalis
NCBI 10.1 XBXL10_1g22671 X. laevis.L
NCBI 10.1 XBXL10_1g24943 X. laevis.S
ENSEMBL 10.0 capn2 X. tropicalis
JGI 9.1 Xelaev18026270m.g X. laevis.L
JGI 9.1 Xelaev18028651m.g X. laevis.S
Xenbase 9.1 gene2467 X. tropicalis
Xenbase 9.2 gene7119 X. laevis.L
Xenbase 9.2 gene5922 X. laevis.S
ENSEMBL 9.1 capn2 X. tropicalis
JGI 8.0 Xetrov14024541m.g X. tropicalis
JGI 7.1 Xetro.E01608 X. tropicalis
JGI 7.2 Xelaev16000668m.g X. laevis.L
JGI 6.0 XeXenL6RMv10004354m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018599 X. tropicalis
JGI 4.1 e_gw1.528.95.1 X. tropicalis
JGI 4.1 e_gw1.528.113.1 X. tropicalis
JGI 4.1 e_gw1.528.93.1 X. tropicalis
JGI 4.1 gw1.528.113.1 X. tropicalis
JGI 4.1 gw1.528.93.1 X. tropicalis
JGI 4.1 gw1.528.95.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_528000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_528000012 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.0 mRNA081016 X. tropicalis
NCBI 10.1 XBmRNA42260 X. laevis.L
NCBI 10.1 XBmRNA46527 X. laevis.S
ENSEMBL 10.0 ENSXETT00000074816 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100515 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069321 X. tropicalis
ENSEMBL 10.0 ENSXETT00000040260 X. tropicalis
JGI 9.1 Xelaev18026270m X. laevis.L
JGI 9.1 Xelaev18028651m X. laevis.S
Xenbase 9.1 rna8198 X. tropicalis
Xenbase 9.2 rna20789 X. laevis.L
Xenbase 9.2 rna17340 X. laevis.S
ENSEMBL 9.1 ENSXETT00000074816 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066382 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069321 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078097 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102561 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069314 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040260 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098366 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073923 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100515 X. tropicalis
JGI 8.0 Xetrov14024541m X. tropicalis
JGI 7.1 Xetro.E01608.2 X. tropicalis
JGI 7.1 Xetro.E01608.3 X. tropicalis
JGI 7.1 Xetro.E01608.1 X. tropicalis
JGI 7.2 Xelaev16000668m X. laevis.L
JGI 6.0 XeXenL6RMv10004354m X. laevis.L
JGI 4.1 e_gw1.528.95.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040260 X. tropicalis
JGI 4.1 e_gw1.528.113.1 X. tropicalis
JGI 4.1 e_gw1.528.93.1 X. tropicalis
JGI 4.1 gw1.528.113.1 X. tropicalis
JGI 4.1 gw1.528.93.1 X. tropicalis
JGI 4.1 gw1.528.95.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_528000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_528000012 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
NM_001005446 X. tropicalis
IMAGE:5308501 BC074555 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
XM_031901618 X. tropicalis
XM_031901617 X. tropicalis
XM_031901616 X. tropicalis
IMAGE:3399721 BC063733 X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
NM_001090244 X. laevis.L
XM_018264960 X. laevis.S
XM_018264959 X. laevis.S
XM_041562125 X. laevis.L

ESTs (76)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:5308501 BQ390692 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7658063 CX836619 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8867111 EL705937 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8929132 EL677792 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8853598 EL815572 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr21B05 CN103613 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr41H07 CN114720 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA008l24 CR414338 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047c21 CR415568 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7527570 CX424501 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522211 CX470888 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6979887 CF148987 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7026669 CF783007 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7028369 CF786199 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTpA070p23 BX717400 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA051m19 BX719436 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas076f21 AL774102 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092f21 AL966040 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8853598 EL815573 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7754570 DN056770 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7658063 CX836618 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7522211 CX470887 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8867111 EL705936 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8929132 EL677791 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TGas076f21 BX750042 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas092f21 BX764538 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr41H07 CN114719 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA008l24 CR414339 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7026669 CF783006 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7027399 CF784243 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTpA070p23 BX717401 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5308501 BQ390691 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8317837 DY569392 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8643653 EB737214 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
xlk66o23ex DC056443 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl230e21 DC102759 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl276o02 DC116678 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl241g02 DC106148 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGp998J049549 BX848011 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998C127823 BX848414 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGp998B0510199 BX848652 5' X. laevis.L Wellcome CRC pcDNAI St24-26 whole organism NF stage 24 to NF stage 26
IMAGE:7977627 DR728918 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:5516239 CF286412 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5536534 CF288630 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL088a05 BJ066722 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065m16 BJ060444 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108a09 BJ072807 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071g23 BJ074785 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3550220 BG578967 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:4957210 BI447996 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542933 BQ734884 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5572297 BQ734016 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4682690 BQ734660 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6936043 CB984221 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6940574 CD100940 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6936043 CD811227 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3200195 AW767479 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:3399721 BE576587 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:3579835 BG162944 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:4203227 BG552892 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8641345 EB735746 3' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
rxl300k09 DC088382 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl268c18 DC079331 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL065m16 BJ078663 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL071g23 BJ081376 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088a05 BJ084054 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL108a09 BJ089770 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL057i19 BJ092840 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5536534 CF288629 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL044p02 BJ054656 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL104p12 BJ076207 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4203227 BG579661 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4957210 BI447677 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3201137 AW767777 3' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:3579835 BG021128 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:4202595 BG161604 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32