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Summary Expression Phenotypes Gene Literature (1) GO Terms (0) Nucleotides (162) Proteins (37) Interactants (27) Wiki
XB-GENEPAGE-993610

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ubtd1 - All

RefSeq mRNAs(2)
Models - Gene (23)
Models - mRNA (24)
mRNAs (5)
ESTs (89)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001005656 ubiquitin domain-containing protein 1 3519 bp NP_001005656 X. tropicalis
XM_041571049 XP_041426983.1 ubiquitin domain-containing protein 1 3615 bp XP_041426983 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g017716 X. tropicalis
NCBI 10.1 XBXL10_1g32797 X. laevis.S
NCBI 10.1 XBXL10_1g30441 X. laevis.L
ENSEMBL 10.0 ubtd1 X. tropicalis
JGI 9.1 Xelaev18037082m.g X. laevis.S
JGI 9.1 Xelaev18034690m.g X. laevis.L
Xenbase 9.1 gene28490 X. tropicalis
Xenbase 9.2 gene46866 X. laevis.S
Xenbase 9.2 gene12739 X. laevis.L
ENSEMBL 9.1 ubtd1 X. tropicalis
JGI 7.1 Xetro.G00558 X. tropicalis
JGI 6.0 XeXenL6RMv10015492m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000027099 X. tropicalis
JGI 4.1 e_gw1.517.24.1 X. tropicalis
JGI 4.1 e_gw1.517.43.1 X. tropicalis
JGI 4.1 e_gw1.517.56.1 X. tropicalis
JGI 4.1 gw1.517.24.1 X. tropicalis
JGI 4.1 gw1.517.56.1 X. tropicalis
JGI 4.1 gw1.517.43.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_517000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_517000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000018 X. tropicalis

mRNAs based on gene models(24)

Source Version Model Species
NCBI 10.0 mRNA087440 X. tropicalis
NCBI 10.1 XBmRNA57338 X. laevis.L
NCBI 10.1 XBmRNA61893 X. laevis.S
ENSEMBL 10.0 ENSXETT00000108155 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081060 X. tropicalis
JGI 9.1 Xelaev18034690m X. laevis.L
JGI 9.1 Xelaev18037082m X. laevis.S
Xenbase 9.1 rna55130 X. tropicalis
Xenbase 9.2 rna37020 X. laevis.L
Xenbase 9.2 rna91809 X. laevis.S
ENSEMBL 9.1 ENSXETT00000081060 X. tropicalis
JGI 7.1 Xetro.G00558.1 X. tropicalis
JGI 6.0 XeXenL6RMv10015492m X. laevis.S
JGI 4.1 e_gw1.517.24.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031565 X. tropicalis
JGI 4.1 e_gw1.517.43.1 X. tropicalis
JGI 4.1 e_gw1.517.56.1 X. tropicalis
JGI 4.1 gw1.517.24.1 X. tropicalis
JGI 4.1 gw1.517.56.1 X. tropicalis
JGI 4.1 gw1.517.43.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_517000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_517000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000018 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001005656 X. tropicalis
IMAGE:5335363 BC074677 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_012966359 X. tropicalis
XM_018225260 X. laevis.L
XM_041571049 X. laevis.S

ESTs (89)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu067k09 BX683730 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9009909 EL854176 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8883320 EL838962 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8856768 EL820047 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
st72c01 DC184476 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38d15 DC176205 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28o16 DC171352 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7576035 CX430997 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548343 CX490248 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546253 CX499318 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7597504 CX386753 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7544853 CX486901 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539977 CX452914 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537701 CX446524 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573863 CX437234 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570723 CX455181 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560003 CX515122 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551052 CX510195 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7652955 CX820412 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7544734 CX487048 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520056 CX480146 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519292 CX478922 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522471 CX471655 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521423 CX469760 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7526415 CX443694 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA037g04 CR577296 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA023d24 CR444182 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA079o21 CR433001 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas103c18 AL971318 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109c22 AL969986 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas091a08 AL966121 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128l01 AL959188 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas075a08 AL776957 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas037e15 AL651903 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu067k09 AL800257 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu117g18 AL799704 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu135l12 AL798955 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu138o10 AL798072 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119p24 AL797259 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu066c23 AL778260 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu019a17 AL636463 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6995528 CF239307 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6976543 CF223057 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6986395 CF221892 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6986866 CF221716 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988486 CF220280 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6978336 CF148908 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379031 BQ523065 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5335363 BQ520389 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5307321 BQ388876 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5307322 BQ388703 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
L1G8h03 AL637483 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9009909 EL854177 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8883320 EL838963 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8856768 EL820048 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst72c01 DC154320 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst98e04 DC162320 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst28o16 DC141194 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7520056 CX480145 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7652955 CX820411 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7573863 DR889790 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539977 DR888819 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551052 CX510194 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546253 CX499317 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548343 CX490247 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544734 CX487047 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544853 CX486900 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522471 CX471654 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521423 CX469759 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570723 CX455180 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537701 CX446523 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576035 CX430996 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7597504 CX386752 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA023d24 CR444183 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA079o21 CR433677 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas091a08 BX764384 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128l01 BX761494 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103c18 BX754433 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA076b20 BX721654 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu066c23 BX687348 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6976543 CF223056 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5335363 BQ520388 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5307321 BQ388875 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5307322 BQ388702 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl321i11 DC129453 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL202d23 BJ622762 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4678281 BI477938 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3420773 BG551829 5' X. laevis.S Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
IMAGE:3420773 BG408113 3' X. laevis.S Wellcome CRC pSK St 10 5 whole organism NF stage 10.5