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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (141) Proteins (56) Interactants (12) Wiki
XB-GENEPAGE-993540

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for synrg - Xenopus tropicalis

RefSeq mRNAs(5)
Models - Gene (18)
Models - mRNA (24)
mRNAs (5)
ESTs (22)

RefSeq mRNAs (5)

Accession Version name Length Protein Species
XM_002939639 XM_002939639.5 synergin gamma isoform X1 6156 bp XP_002939685 X. tropicalis
XM_012970285 XM_012970285.2 synergin gamma isoform X4 6059 bp XP_012825739 X. tropicalis
XM_018091503 XM_018091503.2 synergin gamma isoform X2 6153 bp XP_017946992 X. tropicalis
XM_004910648 XM_004910648.4 synergin gamma isoform X3 6120 bp XP_004910705 X. tropicalis
XM_012970289 XM_012970289.3 synergin gamma isoform X4 5994 bp XP_012825743 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g018985 X. tropicalis
ENSEMBL 10.0 synrg X. tropicalis
Xenbase 9.1 gene18423 X. tropicalis
ENSEMBL 9.1 synrg X. tropicalis
JGI 7.1 Xetro.A01151 X. tropicalis
ENSEMBL 4.1 ENSXETG00000007990 X. tropicalis
JGI 4.1 e_gw1.512.48.1 X. tropicalis
JGI 4.1 e_gw1.512.26.1 X. tropicalis
JGI 4.1 e_gw1.512.83.1 X. tropicalis
JGI 4.1 gw1.512.26.1 X. tropicalis
JGI 4.1 gw1.512.48.1 X. tropicalis
JGI 4.1 gw1.512.83.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5120017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120083 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5120024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_512000024 X. tropicalis

mRNAs based on gene models(24)

Source Version Model Species
NCBI 10.0 mRNA093847 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090671 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064495 X. tropicalis
Xenbase 9.1 rna39152 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064495 X. tropicalis
ENSEMBL 9.1 ENSXETT00000017519 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061514 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066983 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090671 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079866 X. tropicalis
JGI 7.1 Xetro.A01151.1 X. tropicalis
JGI 4.1 e_gw1.512.48.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017519 X. tropicalis
JGI 4.1 e_gw1.512.26.1 X. tropicalis
JGI 4.1 e_gw1.512.83.1 X. tropicalis
JGI 4.1 gw1.512.26.1 X. tropicalis
JGI 4.1 gw1.512.48.1 X. tropicalis
JGI 4.1 gw1.512.83.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5120017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120026 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5120083 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5120024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_512000024 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
XM_002939639 X. tropicalis
XM_012970289 X. tropicalis
XM_004910648 X. tropicalis
XM_018091503 X. tropicalis
XM_012970285 X. tropicalis

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9011826 EL857422 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885382 EL841872 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8941081 EL631741 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7788022 CX333324 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7566432 CX506568 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7703500 CX939689 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693664 CX920670 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687136 CX908565 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7530305 CX419446 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA022a04 CR587231 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017f05 CR568397 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas014f02 AL630903 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu096g05 AL791375 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9011826 EL857423 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885382 EL841873 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7703500 CX939688 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7788022 DR904732 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7693664 CX920669 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687136 CX908564 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7566432 CX506567 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA022a04 CR587232 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017f05 CR568398 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30