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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (142) Proteins (43) Interactants (15) Wiki
XB-GENEPAGE-993179

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for snapc1 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (21)
Models - mRNA (23)
mRNAs (5)
ESTs (28)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001079178 NM_001079178.1 snRNA-activating protein complex subunit 1 3522 bp NP_001072646 X. tropicalis
XM_012968642 XM_012968642.3 snRNA-activating protein complex subunit 1 isoform X1 3546 bp XP_012824096 X. tropicalis
XM_012968643 XM_012968643.3 snRNA-activating protein complex subunit 1 isoform X1 3549 bp XP_012824097 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g010238 X. tropicalis
ENSEMBL 10.0 snapc1 X. tropicalis
Xenbase 9.1 gene3501 X. tropicalis
ENSEMBL 9.1 snapc1 X. tropicalis
JGI 8.0 Xetrov14035070m.g X. tropicalis
JGI 7.1 Xetro.H01601 X. tropicalis
ENSEMBL 4.1 ENSXETG00000014446 X. tropicalis
JGI 4.1 e_gw1.491.47.1 X. tropicalis
JGI 4.1 e_gw1.491.4.1 X. tropicalis
JGI 4.1 e_gw1.491.59.1 X. tropicalis
JGI 4.1 gw1.491.4.1 X. tropicalis
JGI 4.1 gw1.491.47.1 X. tropicalis
JGI 4.1 gw1.491.59.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4910008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910059 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4910005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000005 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.0 mRNA050601 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031606 X. tropicalis
Xenbase 9.1 rna11497 X. tropicalis
ENSEMBL 9.1 ENSXETT00000031606 X. tropicalis
JGI 8.0 Xetrov14035070m X. tropicalis
JGI 7.1 Xetro.H01601.2 X. tropicalis
JGI 7.1 Xetro.H01601.3 X. tropicalis
JGI 7.1 Xetro.H01601.1 X. tropicalis
JGI 4.1 e_gw1.491.47.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031606 X. tropicalis
JGI 4.1 e_gw1.491.4.1 X. tropicalis
JGI 4.1 e_gw1.491.59.1 X. tropicalis
JGI 4.1 gw1.491.4.1 X. tropicalis
JGI 4.1 gw1.491.47.1 X. tropicalis
JGI 4.1 gw1.491.59.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4910008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910059 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4910005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000005 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001079178 X. tropicalis
IMAGE:7694035 BC123928 X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7572755 BC160492 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_012968643 X. tropicalis
XM_012968642 X. tropicalis

ESTs (28)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8885488 EL842514 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8913613 EL825767 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8859572 EL824251 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8866880 EL705289 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs31L14 CN089600 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO10376 CX959545 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8221 CX942440 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7533649 CX427388 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572755 CX435850 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568267 CX456174 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555286 CX502360 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7694035 CX921289 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas106l18 AL967995 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas109l05 AL956736 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas014j03 AL630749 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA075o15 BX739439 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu061h22 AL674101 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8885488 EL842515 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8913613 EL825768 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8866880 EL705288 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs31L14 CN089599 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO10376 CX959544 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7555286 CX502359 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7694035 CX921288 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7568267 CX456173 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572755 CX435849 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas106l18 BX754323 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu061h22 BX684630 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21