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XB-GENEPAGE-993051
Nucleotide sequences for opn1sw - All
RefSeq mRNAs(3) |
Models - Gene (25) |
Models - mRNA (26) |
mRNAs (7) |
ESTs (80) |
RefSeq mRNAs (3)
Accession | Version | name | Length | Protein | Species |
NM_001126076 | short-wave-sensitive opsin 1 | 2195 bp | NP_001119548 | X. tropicalis | |
NM_001085652 | violet-sensitive opsin | 2266 bp | NP_001079121 | X. laevis.L | |
MN820842 | QPJ58110.1 short-wave sensitive 1 cone opsin | 1100 bp | QPJ58110 | X. laevis.L |
Models - Gene (25)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g014584 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g12913 | X. laevis.L |
ENSEMBL | 10.0 | opn1sw | X. tropicalis |
JGI | 9.1 | Xelaev18017931m.g | X. laevis.L |
Xenbase | 9.1 | gene2480 | X. tropicalis |
Xenbase | 9.2 | gene1022 | X. laevis.L |
ENSEMBL | 9.1 | opn1sw | X. tropicalis |
JGI | 7.1 | Xetro.C02109 | X. tropicalis |
JGI | 7.2 | Xelaev16007192m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10040704m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000023057 | X. tropicalis |
JGI | 4.1 | e_gw1.480.22.1 | X. tropicalis |
JGI | 4.1 | e_gw1.480.3.1 | X. tropicalis |
JGI | 4.1 | e_gw1.480.31.1 | X. tropicalis |
JGI | 4.1 | gw1.480.22.1 | X. tropicalis |
JGI | 4.1 | gw1.480.3.1 | X. tropicalis |
JGI | 4.1 | gw1.480.31.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_4800006 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_4800003 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_4800022 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_4800031 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_4800011 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_4800003 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_480000011 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_480000003 | X. tropicalis |
mRNAs based on gene models(26)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA072103 | X. tropicalis |
NCBI | 10.1 | XBmRNA24436 | X. laevis.L |
ENSEMBL | 10.0 | ENSXETT00000049850 | X. tropicalis |
JGI | 9.1 | Xelaev18017931m | X. laevis.L |
Xenbase | 9.1 | rna8228 | X. tropicalis |
Xenbase | 9.2 | rna2993 | X. laevis.L |
ENSEMBL | 9.1 | ENSXETT00000066532 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000049850 | X. tropicalis |
JGI | 7.1 | Xetro.C02109.1 | X. tropicalis |
JGI | 7.2 | Xelaev16007192m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10040704m | X. laevis.L |
JGI | 4.1 | e_gw1.480.22.1 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000049850 | X. tropicalis |
JGI | 4.1 | e_gw1.480.3.1 | X. tropicalis |
JGI | 4.1 | e_gw1.480.31.1 | X. tropicalis |
JGI | 4.1 | gw1.480.22.1 | X. tropicalis |
JGI | 4.1 | gw1.480.3.1 | X. tropicalis |
JGI | 4.1 | gw1.480.31.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_4800006 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_4800003 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_4800022 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_4800031 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_4800011 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_4800003 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_480000011 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_480000003 | X. tropicalis |
mRNAs from cDNA libraries (7)
Clone | Accession | Species | Library | Anatomy | Stage |
THdA028g24 | CU025212 | X. tropicalis | XGC-tailbud-head | head | NF stage 28 to NF stage 29 and 30 |
IMAGE:7633280 | BC166308 | X. tropicalis | NIH_XGC_tropTad5 | whole organism | NF stage 35 and 36 to NF stage 41 |
NM_001126076 | X. tropicalis | ||||
IMAGE:7018374 | BC084882 | X. laevis.L | |||
U23463 | X. laevis.L | ||||
NM_001085652 | X. laevis.L | ||||
MN820842 | X. laevis.L |