Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (103) Proteins (56) Interactants (106) Wiki
XB-GENEPAGE-992372

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hmbox1 - All

RefSeq mRNAs(14)
Models - Gene (20)
Models - mRNA (22)
mRNAs (16)
ESTs (12)

RefSeq mRNAs (14)

Accession Version Protein Name Length Protein Species
XM_031903085 XM_031903085.1 XP_031758945.1 homeobox-containing protein 1 isoform X2 4084 bp XP_031758945 X. tropicalis
XM_031903086 XM_031903086.1 XP_031758946.1 homeobox-containing protein 1 isoform X3 4081 bp XP_031758946 X. tropicalis
XM_031903087 XM_031903087.1 XP_031758947.1 homeobox-containing protein 1 isoform X4 4137 bp XP_031758947 X. tropicalis
XM_031903088 XM_031903088.1 XP_031758948.1 homeobox-containing protein 1 isoform X5 1554 bp XP_031758948 X. tropicalis
XM_031903084 XM_031903084.1 XP_031758944.1 homeobox-containing protein 1 isoform X1 4087 bp XP_031758944 X. tropicalis
XM_018266022 XM_018266022.2 homeobox-containing protein 1 isoform X1 1694 bp XP_018121511 X. laevis.S
XM_018266024 XM_018266024.2 homeobox-containing protein 1 isoform X1 1609 bp XP_018121513 X. laevis.S
XM_018266027 XM_018266027.2 homeobox-containing protein 1 isoform X2 1692 bp XP_018121516 X. laevis.S
XM_018266028 XM_018266028.2 homeobox-containing protein 1 isoform X3 1689 bp XP_018121517 X. laevis.S
XM_018266029 XM_018266029.2 homeobox-containing protein 1 isoform X4 1614 bp XP_018121518 X. laevis.S
NM_001093483 NM_001093483.1 homeobox containing 1 L homeolog isoform 2 2946 bp NP_001086952 X. laevis.L
NM_001093630 NM_001093630.1 homeobox containing 1 L homeolog isoform 1 2928 bp NP_001087099 X. laevis.L
XM_041565101 XM_041565101.1 XP_041421035.1 homeobox-containing protein 1 isoform X5 1611 bp XP_041421035 X. laevis.S
XM_041565102 XM_041565102.1 XP_041421036.1 homeobox-containing protein 1 isoform X6 1609 bp XP_041421036 X. laevis.S

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g006843 X. tropicalis
NCBI 10.1 XBXL10_1g26290 X. laevis.S
NCBI 10.1 XBXL10_1g24566 X. laevis.L
ENSEMBL 10.0 hmbox1 X. tropicalis
JGI 9.1 Xelaev18030207m.g X. laevis.S
JGI 9.1 Xelaev18028253m.g X. laevis.L
Xenbase 9.1 gene17937 X. tropicalis
Xenbase 9.2 gene19112 X. laevis.S
Xenbase 9.2 gene49452 X. laevis.L
JGI 7.1 Xetro.K04809 X. tropicalis
JGI 7.2 Xelaev16000429m.g X. laevis.S
JGI 6.0 XeXenL6RMv10036663m.g X. laevis.S
JGI 6.0 XeXenL6RMv10041016m.g X. laevis.S
JGI 6.0 XeXenL6RMv10036663m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027568 X. tropicalis
JGI 4.1 e_gw1.428.46.1 X. tropicalis
JGI 4.1 e_gw1.428.31.1 X. tropicalis
JGI 4.1 gw1.428.31.1 X. tropicalis
JGI 4.1 gw1.428.46.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_428000018 X. tropicalis

mRNAs based on gene models(22)

Source Version Model Species
NCBI 10.0 mRNA033871 X. tropicalis
NCBI 10.1 XBmRNA45932 X. laevis.L
NCBI 10.1 XBmRNA49127 X. laevis.S
ENSEMBL 10.0 ENSXETT00000114361 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107314 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110969 X. tropicalis
JGI 9.1 Xelaev18028253m X. laevis.L
JGI 9.1 Xelaev18030207m X. laevis.S
Xenbase 9.1 rna38408 X. tropicalis
Xenbase 9.2 rna95432 X. laevis.L
Xenbase 9.2 rna55804 X. laevis.S
JGI 7.1 Xetro.K04809.1 X. tropicalis
JGI 7.2 Xelaev16000429m X. laevis.S
JGI 6.0 XeXenL6RMv10036663m X. laevis.S
JGI 6.0 XeXenL6RMv10036663m X. laevis.L
JGI 6.0 XeXenL6RMv10041016m X. laevis.S
JGI 4.1 e_gw1.428.46.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057448 X. tropicalis
JGI 4.1 e_gw1.428.31.1 X. tropicalis
JGI 4.1 gw1.428.31.1 X. tropicalis
JGI 4.1 gw1.428.46.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_428000018 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
XM_031903088 X. tropicalis
XM_031903087 X. tropicalis
XM_031903086 X. tropicalis
XM_031903085 X. tropicalis
XM_031903084 X. tropicalis
IMAGE:5155930 BC077815 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6864741 BC077394 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001093630 X. laevis.L
NM_001093483 X. laevis.L
XM_018266029 X. laevis.S
XM_018266028 X. laevis.S
XM_018266027 X. laevis.S
XM_018266024 X. laevis.S
XM_018266022 X. laevis.S
XM_041565102 X. laevis.S
XM_041565101 X. laevis.S

ESTs (12)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6864741 CA988006 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6940180 CD100546 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL020b04 BJ033202 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL162i07 BJ613176 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL201a14 BJ622454 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998E0414212 BX850832 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl263p14 DC112943 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6636460 BU910626 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5155930 CA789961 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL020b04 BJ048505 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL201a14 BJ639130 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl263p14 DC078117 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15