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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (141) Proteins (46) Interactants (11) Wiki
XB-GENEPAGE-992238

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for vipas39 - All

RefSeq mRNAs(2)
Models - Gene (26)
Models - mRNA (30)
mRNAs (7)
ESTs (52)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001127080 NM_001127080.1 spermatogenesis-defective protein 39 homolog 1661 bp NP_001120552 X. tropicalis
NM_001095827 NM_001095827.1 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog L homeolog 1934 bp NP_001089296 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g003513 X. tropicalis
NCBI 10.1 XBXL10_1g35731 X. laevis.L
ENSEMBL 10.0 vipas39 X. tropicalis
JGI 9.1 Xelaev18039484m.g X. laevis.L
Xenbase 9.1 gene18969 X. tropicalis
Xenbase 9.2 gene19319 X. laevis.L
ENSEMBL 9.1 vipas39 X. tropicalis
JGI 8.0 Xetrov14034436m.g X. tropicalis
JGI 7.1 Xetro.H01186 X. tropicalis
JGI 7.2 Xelaev16050694m.g X. laevis.L
JGI 6.0 XeXenL6RMv10020048m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011084 X. tropicalis
JGI 4.1 e_gw1.416.14.1 X. tropicalis
JGI 4.1 e_gw1.416.41.1 X. tropicalis
JGI 4.1 e_gw1.416.75.1 X. tropicalis
JGI 4.1 gw1.416.14.1 X. tropicalis
JGI 4.1 gw1.416.41.1 X. tropicalis
JGI 4.1 gw1.416.75.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4160012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4160014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4160041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4160075 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4160005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4160019 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_416000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_416000020 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA017832 X. tropicalis
NCBI 10.1 XBmRNA67459 X. laevis.L
ENSEMBL 10.0 ENSXETT00000123062 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107403 X. tropicalis
ENSEMBL 10.0 ENSXETT00000024211 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090041 X. tropicalis
JGI 9.1 Xelaev18039484m X. laevis.L
Xenbase 9.1 rna39936 X. tropicalis
Xenbase 9.2 rna56432 X. laevis.L
ENSEMBL 9.1 ENSXETT00000090041 X. tropicalis
ENSEMBL 9.1 ENSXETT00000024211 X. tropicalis
JGI 8.0 Xetrov14034436m X. tropicalis
JGI 7.1 Xetro.H01186.1 X. tropicalis
JGI 7.2 Xelaev16050694m X. laevis.L
JGI 6.0 XeXenL6RMv10020048m X. laevis.L
JGI 4.1 e_gw1.416.14.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024211 X. tropicalis
JGI 4.1 e_gw1.416.41.1 X. tropicalis
JGI 4.1 e_gw1.416.75.1 X. tropicalis
JGI 4.1 gw1.416.14.1 X. tropicalis
JGI 4.1 gw1.416.41.1 X. tropicalis
JGI 4.1 gw1.416.75.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4160012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4160014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4160041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4160075 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4160005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4160019 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_416000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_416000020 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7551453 BC161485 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001127080 X. tropicalis
XM_031890223 X. tropicalis
XM_031890222 X. tropicalis
XM_031890221 X. tropicalis
IMAGE:6871619 BC090245 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
NM_001095827 X. laevis.L

ESTs (52)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9016179 EL863032 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8915175 EL827568 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs27O12 CN086629 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs02D24 CN073021 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7613931 CX389521 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595603 CX335451 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7551453 CX510633 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7719295 CX981910 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7713221 CX970906 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7707856 CX960859 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7667726 CX855028 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA077l22 CR431089 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028g15 CR419755 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas014f19 AL630733 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6984921 CF151352 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:9016179 EL863033 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8915175 EL827569 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs27O12 CN086628 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs02D24 CN073020 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7667726 CX855027 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7719295 CX981909 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7707856 CX960858 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7551453 CX510632 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7613931 CX389520 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595603 CX335450 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA077l22 CR431090 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028g15 CR419756 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA021c08 CR418223 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xl233h15 DC103694 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL448h16ex BP685215 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL443i21ex BP683631 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403n12ex BP682477 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998H118659 BX853921 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL179k23 BJ617164 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL040f13 BJ037381 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5514583 CF287342 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6871619 CA983333 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3437568 BG730196 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4202307 BG233548 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3557050 BF611820 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3431048 BF610725 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3379241 BF048816 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
PBX0015H04 AW634088 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL443i21ex BP719697 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403n12ex BP718804 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL179k23 BJ633663 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3437568 BG885962 3' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4202307 BG159918 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3431048 BF614003 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3557050 BF231554 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3379241 BF049386 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3300561 BE027029 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage