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Summary Expression Phenotypes Gene Literature (9) GO Terms (0) Nucleotides (76) Proteins (55) Interactants (96) Wiki
XB-GENEPAGE-991669

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for prdm16 - All

RefSeq mRNAs(11)
Models - Gene (17)
Models - mRNA (21)
mRNAs (19)
ESTs (2)

RefSeq mRNAs (11)

Accession Version name Length Protein Species
XM_041569450 XM_041569450.1 XP_041425384.1 histone-lysine N-methyltransferase PRDM16 isoform X3 3789 bp XP_041425384 X. laevis.L
XM_041569451 XM_041569451.1 XP_041425385.1 histone-lysine N-methyltransferase PRDM16 isoform X4 6836 bp XP_041425385 X. laevis.L
XM_041571505 XM_041571505.1 XP_041427439.1 histone-lysine N-methyltransferase PRDM16-like isoform X2 4376 bp XP_041427439 X. laevis.S
XM_041571506 XM_041571506.1 XP_041427440.1 histone-lysine N-methyltransferase PRDM16-like isoform X3 4678 bp XP_041427440 X. laevis.S
XM_041571507 XM_041571507.1 XP_041427441.1 histone-lysine N-methyltransferase PRDM16-like isoform X4 4280 bp XP_041427441 X. laevis.S
XM_041571508 XM_041571508.1 XP_041427442.1 histone-lysine N-methyltransferase PRDM16-like isoform X5 4277 bp XP_041427442 X. laevis.S
XM_041571509 XM_041571509.1 XP_041427443.1 histone-lysine N-methyltransferase PRDM16-like isoform X6 3253 bp XP_041427443 X. laevis.S
XM_018226160 XM_018226160. histone-lysine N-methyltransferase PRDM16 isoform X1 7055 bp XP_018081649 X. laevis.L
XM_018226160 XM_018226160. histone-lysine N-methyltransferase PRDM16 isoform X1 7055 bp XP_018081649 X. laevis.L
XM_018228007 XM_018228007. histone-lysine N-methyltransferase PRDM16-like isoform X1 4379 bp XP_018083496 X. laevis.S
XM_041569449 XM_041569449.1 XP_041425383.1 histone-lysine N-methyltransferase PRDM16 isoform X2 6955 bp XP_041425383 X. laevis.L

Models - Gene (17)

Source Version Model Species
NCBI 10.0 XBXT10g001456 X. tropicalis
NCBI 10.1 XBXL10_1g33555 X. laevis.S
NCBI 10.1 XBXL10_1g31441 X. laevis.L
ENSEMBL 10.0 prdm16 X. tropicalis
JGI 9.1 Xelaev18037624m.g X. laevis.S
JGI 9.1 Xelaev18035818m.g X. laevis.L
Xenbase 9.1 gene17144 X. tropicalis
ENSEMBL 9.1 prdm16 X. tropicalis
JGI 7.1 Xetro.G01661 X. tropicalis
JGI 6.0 XeXenL6RMv10007700m.g X. laevis.S
JGI 4.1 e_gw1.378.51.1 X. tropicalis
JGI 4.1 e_gw1.378.40.1 X. tropicalis
JGI 4.1 e_gw1.378.52.1 X. tropicalis
JGI 4.1 gw1.378.40.1 X. tropicalis
JGI 4.1 gw1.378.51.1 X. tropicalis
JGI 4.1 gw1.378.52.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_378000022 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.0 mRNA007337 X. tropicalis
NCBI 10.1 XBmRNA59444 X. laevis.L
NCBI 10.1 XBmRNA63333 X. laevis.S
ENSEMBL 10.0 ENSXETT00000026324 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085188 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097700 X. tropicalis
JGI 9.1 Xelaev18035818m X. laevis.L
JGI 9.1 Xelaev18037624m X. laevis.S
Xenbase 9.1 rna37134 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085188 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097700 X. tropicalis
ENSEMBL 9.1 ENSXETT00000026324 X. tropicalis
JGI 7.1 Xetro.G01661.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007700m X. laevis.S
JGI 4.1 e_gw1.378.51.1 X. tropicalis
JGI 4.1 e_gw1.378.40.1 X. tropicalis
JGI 4.1 e_gw1.378.52.1 X. tropicalis
JGI 4.1 gw1.378.40.1 X. tropicalis
JGI 4.1 gw1.378.51.1 X. tropicalis
JGI 4.1 gw1.378.52.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_378000022 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
XM_018095464 X. tropicalis
XM_031905691 X. tropicalis
XM_031905690 X. tropicalis
XM_031905689 X. tropicalis
XM_031905688 X. tropicalis
XM_031905687 X. tropicalis
XM_031905686 X. tropicalis
XM_018228007 X. laevis.S
XM_018228007 X. laevis.S
XM_018226160 X. laevis.L
XM_018226160 X. laevis.L
XM_041571509 X. laevis.S
XM_041571508 X. laevis.S
XM_041571507 X. laevis.S
XM_041571506 X. laevis.S
XM_041571505 X. laevis.S
XM_041569451 X. laevis.L
XM_041569450 X. laevis.L
XM_041569449 X. laevis.L

ESTs (2)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7691350 CX916689 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7642829 CX797388 5' X. tropicalis NIH_XGC_tropBrn2 brain frog