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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (134) Proteins (60) Interactants (7) Wiki
XB-GENEPAGE-991308

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for shpk - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (21)
Models - mRNA (23)
mRNAs (5)
ESTs (13)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001126606 NM_001126606.1 sedoheptulokinase 1683 bp NP_001120078 X. tropicalis
XM_012956440 XM_012956440.2 sedoheptulokinase isoform X1 1577 bp XP_012811894 X. tropicalis
XM_012956441 XM_012956441.3 sedoheptulokinase isoform X1 1572 bp XP_012811895 X. tropicalis
XM_018091083 XM_018091083.2 sedoheptulokinase isoform X1 1714 bp XP_017946572 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g015787 X. tropicalis
ENSEMBL 10.0 dlx6 X. tropicalis
Xenbase 9.1 gene6158 X. tropicalis
ENSEMBL 9.1 shpk X. tropicalis
JGI 8.0 Xetrov14006649m.g X. tropicalis
JGI 7.1 Xetro.B00548 X. tropicalis
ENSEMBL 4.1 ENSXETG00000005794 X. tropicalis
JGI 4.1 e_gw1.354.41.1 X. tropicalis
JGI 4.1 e_gw1.354.40.1 X. tropicalis
JGI 4.1 e_gw1.354.42.1 X. tropicalis
JGI 4.1 gw1.354.40.1 X. tropicalis
JGI 4.1 gw1.354.41.1 X. tropicalis
JGI 4.1 gw1.354.42.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3540016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3540040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3540041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3540042 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3540005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3540027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_354000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_354000027 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.0 mRNA078079 X. tropicalis
ENSEMBL 10.0 ENSXETT00000012749 X. tropicalis
Xenbase 9.1 rna19880 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012749 X. tropicalis
JGI 8.0 Xetrov14006649m X. tropicalis
JGI 7.1 Xetro.B00548.2 X. tropicalis
JGI 7.1 Xetro.B00548.3 X. tropicalis
JGI 7.1 Xetro.B00548.1 X. tropicalis
JGI 4.1 e_gw1.354.41.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012749 X. tropicalis
JGI 4.1 e_gw1.354.40.1 X. tropicalis
JGI 4.1 e_gw1.354.42.1 X. tropicalis
JGI 4.1 gw1.354.40.1 X. tropicalis
JGI 4.1 gw1.354.41.1 X. tropicalis
JGI 4.1 gw1.354.42.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3540016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3540040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3540041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3540042 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3540005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3540027 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_354000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_354000027 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:8952040 BC158517 X. tropicalis NICHD_XGC_tropInt_60 intestine frog
NM_001126606 X. tropicalis
XM_018091083 X. tropicalis
XM_012956441 X. tropicalis
XM_012956440 X. tropicalis

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8858428 EL822265 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8952040 EL653292 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7799847 DN061235 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7706599 CX958323 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7669671 CX876122 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA067d06 BX721441 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA010b04 BX707802 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8858428 EL822266 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7706599 CX958322 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7669671 CX876121 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7799847 DN061234 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
TTpA067d06 BX721442 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA010b04 BX707803 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40