Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (6) Nucleotides (161) Proteins (40) Interactants (23) Wiki
XB-GENEPAGE-990885

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for fdx1 - All

RefSeq mRNAs(1)
Models - Gene (28)
Models - mRNA (28)
mRNAs (5)
ESTs (66)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001097772 ferredoxin 1 L homeolog 1181 bp NP_001091241 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g013470 X. tropicalis
NCBI 10.1 XBXL10_1g8489 X. laevis.L
NCBI 10.1 XBXL10_1g11060 X. laevis.S
ENSEMBL 10.0 fdx1 X. tropicalis
JGI 9.1 Xelaev18013836m.g X. laevis.L
JGI 9.1 Xelaev18016299m.g X. laevis.S
Xenbase 9.1 gene30810 X. tropicalis
Xenbase 9.2 gene12682 X. laevis.L
Xenbase 9.2 gene17575 X. laevis.S
ENSEMBL 9.1 fdx1 X. tropicalis
JGI 8.0 Xetrov14010718m.g X. tropicalis
JGI 7.1 Xetro.B01893 X. tropicalis
JGI 7.2 Xelaev16009818m.g X. laevis.L
JGI 6.0 XeXenL6RMv10019001m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000013930 X. tropicalis
JGI 4.1 e_gw1.329.92.1 X. tropicalis
JGI 4.1 e_gw1.329.46.1 X. tropicalis
JGI 4.1 e_gw1.329.53.1 X. tropicalis
JGI 4.1 gw1.329.46.1 X. tropicalis
JGI 4.1 gw1.329.53.1 X. tropicalis
JGI 4.1 gw1.329.92.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290092 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3290001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3290003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_329000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_329000003 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.0 mRNA066748 X. tropicalis
NCBI 10.1 XBmRNA16062 X. laevis.L
NCBI 10.1 XBmRNA20812 X. laevis.S
ENSEMBL 10.0 ENSXETT00000030454 X. tropicalis
JGI 9.1 Xelaev18013836m X. laevis.L
JGI 9.1 Xelaev18016299m X. laevis.S
Xenbase 9.1 rna58832 X. tropicalis
Xenbase 9.2 rna36833 X. laevis.L
Xenbase 9.2 rna51332 X. laevis.S
ENSEMBL 9.1 ENSXETT00000030454 X. tropicalis
JGI 8.0 Xetrov14010718m X. tropicalis
JGI 7.1 Xetro.B01893.1 X. tropicalis
JGI 7.2 Xelaev16009818m X. laevis.L
JGI 6.0 XeXenL6RMv10019001m X. laevis.L
JGI 4.1 e_gw1.329.92.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030454 X. tropicalis
JGI 4.1 e_gw1.329.46.1 X. tropicalis
JGI 4.1 e_gw1.329.53.1 X. tropicalis
JGI 4.1 gw1.329.46.1 X. tropicalis
JGI 4.1 gw1.329.53.1 X. tropicalis
JGI 4.1 gw1.329.92.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290092 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3290001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3290003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_329000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_329000003 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
TTbA049c04 CU075324 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XM_002937956 X. tropicalis
IMAGE:8329034 BC130165 X. laevis.L
NM_001097772 X. laevis.L
XM_018250336 X. laevis.S

ESTs (66)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8912494 EL809127 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7632887 CX373983 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620915 CX341380 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619354 CX347063 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7798940 DN060255 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7737735 DN025158 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7736376 DN023593 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7708386 CX962300 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7527731 CX444831 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA049c04 CR429737 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr05H10 CN118588 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN102065 CN102065 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094774 CN094774 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas131i17 AL972652 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas028h06 AL652522 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA035l19 BX728671 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA062c02 BX727517 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA040g14 BX715567 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu121k10 AL799987 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu123a01 AL787537 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas065h16 AL682919 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6999757 CF343509 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6999757 CF343508 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6989937 CF219153 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989937 CF219152 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308602 BQ390556 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8912494 EL809128 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7798940 DN060254 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7737735 DN025157 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7736376 DN023592 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7708386 CX962299 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7527731 CX444830 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7632887 CX373982 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA049c04 CR429738 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr29B17 CN106422 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN102064 CN102064 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094773 CN094773 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094772 CN094772 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas131i17 BX758853 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA063j09 BX744018 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA035l17 BX728670 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu123a01 BX700787 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5308602 BQ390555 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl326l18 DC131072 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8530303 EB474292 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL503a04ex BP701832 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL502a04ex BP701554 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998N2211403 BX852292 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGp998K2310557 BX846352 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5162709 BQ398555 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4679950 BI449635 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3421338 BG551976 5' X. laevis.L Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
PBX0162G12 AW646341 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0113F12 AW642079 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0104D10 AW641274 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl326l18 DC095176 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL503a04ex BP734782 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL502a04ex BP734545 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL148o19 BJ099046 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5162709 BQ398554 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4679950 BM172596 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4678035 BI443242 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3474861 BI347653 3' X. laevis.L Wellcome CRC pcDNAI St10 5 whole organism NF stage 10.5
IMAGE:3474892 BI347574 3' X. laevis.L Wellcome CRC pcDNAI St10 5 whole organism NF stage 10.5
IMAGE:3581020 BG552317 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3421338 BG414054 3' X. laevis.L Wellcome CRC pSK St 10 5 whole organism NF stage 10.5