Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (2) Nucleotides (137) Proteins (72) Interactants (7) Wiki
XB-GENEPAGE-989731

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hmgxb3 - All

RefSeq mRNAs(8)
Models - Gene (24)
Models - mRNA (36)
mRNAs (16)
ESTs (17)

RefSeq mRNAs (8)

Accession Version name Length Protein Species
NM_001127168 NM_001127168.1 HMG domain-containing protein 3 4180 bp NP_001120640 X. tropicalis
NM_001096015 NM_001096015.1 HMG-box containing 3 L homeolog 4056 bp NP_001089484 X. laevis.L
XM_041585253 XM_041585253.1 XP_041441187.1 HMG-box containing 3 L homeolog isoform X1 7568 bp XP_041441187 X. laevis.L
XM_041585254 XM_041585254.1 XP_041441188.1 HMG-box containing 3 L homeolog isoform X2 7395 bp XP_041441188 X. laevis.L
XM_041585255 XM_041585255.1 XP_041441189.1 HMG-box containing 3 L homeolog isoform X5 7400 bp XP_041441189 X. laevis.L
XM_041585256 XM_041585256.1 XP_041441190.1 HMG-box containing 3 L homeolog isoform X6 7177 bp XP_041441190 X. laevis.L
XM_041585257 XM_041585257.1 XP_041441191.1 HMG-box containing 3 L homeolog isoform X6 7035 bp XP_041441191 X. laevis.L
XM_041585258 XM_041585258.1 XP_041441192.1 HMG-box containing 3 L homeolog isoform X7 8791 bp XP_041441192 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g014613 X. tropicalis
NCBI 10.1 XBXL10_1g11904 X. laevis.L
ENSEMBL 10.0 hmgxb3 X. tropicalis
JGI 9.1 Xelaev18016794m.g X. laevis.L
Xenbase 9.1 gene2026 X. tropicalis
Xenbase 9.2 gene38245 X. laevis.L
ENSEMBL 9.1 hmgxb3 X. tropicalis
JGI 8.0 Xetrov14015958m.g X. tropicalis
JGI 7.1 Xetro.C01010 X. tropicalis
JGI 7.2 Xelaev16068469m.g X. laevis.L
JGI 6.0 XeXenL6RMv10015378m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000015798 X. tropicalis
JGI 4.1 e_gw1.278.51.1 X. tropicalis
JGI 4.1 e_gw1.278.14.1 X. tropicalis
JGI 4.1 e_gw1.278.79.1 X. tropicalis
JGI 4.1 gw1.278.14.1 X. tropicalis
JGI 4.1 gw1.278.51.1 X. tropicalis
JGI 4.1 gw1.278.79.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2780002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2780014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2780051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2780079 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2780003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_278000003 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA072234 X. tropicalis
NCBI 10.1 XBmRNA22226 X. laevis.L
ENSEMBL 10.0 ENSXETT00000099653 X. tropicalis
ENSEMBL 10.0 ENSXETT00000034446 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090685 X. tropicalis
ENSEMBL 10.0 ENSXETT00000034030 X. tropicalis
JGI 9.1 Xelaev18016794m X. laevis.L
Xenbase 9.1 rna6650 X. tropicalis
Xenbase 9.2 rna79326 X. laevis.L
ENSEMBL 9.1 ENSXETT00000034446 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090685 X. tropicalis
ENSEMBL 9.1 ENSXETT00000034030 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099653 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103737 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102570 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076687 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071461 X. tropicalis
JGI 8.0 Xetrov14015958m X. tropicalis
JGI 7.1 Xetro.C01010.2 X. tropicalis
JGI 7.1 Xetro.C01010.3 X. tropicalis
JGI 7.1 Xetro.C01010.1 X. tropicalis
JGI 7.2 Xelaev16068469m X. laevis.L
JGI 6.0 XeXenL6RMv10015378m X. laevis.L
JGI 4.1 e_gw1.278.51.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000034446 X. tropicalis
JGI 4.1 e_gw1.278.14.1 X. tropicalis
JGI 4.1 e_gw1.278.79.1 X. tropicalis
JGI 4.1 gw1.278.14.1 X. tropicalis
JGI 4.1 gw1.278.51.1 X. tropicalis
JGI 4.1 gw1.278.79.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2780002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2780014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2780051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2780079 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2780003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_278000003 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
IMAGE:7686382 BC166189 X. tropicalis
NM_001127168 X. tropicalis
XM_012958614 X. tropicalis
XM_012958613 X. tropicalis
IMAGE:6637877 BC097699 X. laevis.L
NM_001096015 X. laevis.L
XM_018251216 X. laevis.L
XM_018251214 X. laevis.L
XM_018251213 X. laevis.L
XM_018251210 X. laevis.L
XM_041585258 X. laevis.L
XM_041585257 X. laevis.L
XM_041585256 X. laevis.L
XM_041585255 X. laevis.L
XM_041585254 X. laevis.L
XM_041585253 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs32O10 CN089929 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st58j10 DC181069 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st4n15 DC174369 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st1n15 DC168766 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAN12204 CX928712 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7531464 CX421574 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7692483 CX918330 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686449 CX907744 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas012j21 AL633989 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst58j10 DC150805 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst4n15 DC144043 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst1n15 DC138587 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAN12204 CX928711 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692483 CX918329 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686449 CX907743 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7531464 CX421573 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL145g13 BJ094412 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5