Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (81) Proteins (37) Interactants (1) Wiki
XB-GENEPAGE-989114

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ttc9 - All

RefSeq mRNAs(5)
Models - Gene (21)
Models - mRNA (21)
mRNAs (6)
ESTs (19)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_018096781 XM_018096781.2 tetratricopeptide repeat protein 9A isoform X2 844 bp XP_017952270 X. tropicalis
XM_002936884 XM_002936884.5 tetratricopeptide repeat protein 9A isoform X1 7328 bp XP_002936930 X. tropicalis
NM_001135229 NM_001135229.1 tetratricopeptide repeat domain 9 L homeolog 4571 bp NP_001128701 X. laevis.L
XM_018232230 XM_018232230.2 tetratricopeptide repeat protein 9A isoform X1 1741 bp XP_018087719 X. laevis.S
XM_018232231 XM_018232231.2 tetratricopeptide repeat protein 9A isoform X2 1509 bp XP_018087720 X. laevis.S

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g009861 X. tropicalis
NCBI 10.1 XBXL10_1g36085 X. laevis.L
NCBI 10.1 XBXL10_1g37158 X. laevis.S
ENSEMBL 10.0 ttc9 X. tropicalis
JGI 9.1 Xelaev18039899m.g X. laevis.L
JGI 9.1 Xelaev18041066m.g X. laevis.S
Xenbase 9.1 gene240 X. tropicalis
Xenbase 9.2 gene17363 X. laevis.L
Xenbase 9.2 gene3724 X. laevis.S
ENSEMBL 9.1 ttc9 X. tropicalis
JGI 7.1 Xetro.H01758 X. tropicalis
JGI 7.2 Xelaev16080500m.g X. laevis.L
JGI 6.0 XeXenL6RMv10016406m.g X. laevis.L
JGI 6.0 XeXenL6RMv10050872m.g X. laevis.L
JGI 4.1 e_gw1.246.54.1 X. tropicalis
JGI 4.1 e_gw1.246.24.1 X. tropicalis
JGI 4.1 e_gw1.246.26.1 X. tropicalis
JGI 4.1 gw1.246.24.1 X. tropicalis
JGI 4.1 gw1.246.26.1 X. tropicalis
JGI 4.1 gw1.246.54.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_246000015 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.0 mRNA048797 X. tropicalis
NCBI 10.1 XBmRNA68272 X. laevis.L
NCBI 10.1 XBmRNA70090 X. laevis.S
ENSEMBL 10.0 ENSXETT00000074092 X. tropicalis
JGI 9.1 Xelaev18039899m X. laevis.L
JGI 9.1 Xelaev18041066m X. laevis.S
Xenbase 9.1 rna734 X. tropicalis
Xenbase 9.2 rna50689 X. laevis.L
Xenbase 9.2 rna10847 X. laevis.S
ENSEMBL 9.1 ENSXETT00000074092 X. tropicalis
JGI 7.1 Xetro.H01758.1 X. tropicalis
JGI 7.2 Xelaev16080500m X. laevis.L
JGI 6.0 XeXenL6RMv10016406m X. laevis.L
JGI 6.0 XeXenL6RMv10050872m X. laevis.L
JGI 4.1 e_gw1.246.54.1 X. tropicalis
JGI 4.1 e_gw1.246.24.1 X. tropicalis
JGI 4.1 e_gw1.246.26.1 X. tropicalis
JGI 4.1 gw1.246.24.1 X. tropicalis
JGI 4.1 gw1.246.26.1 X. tropicalis
JGI 4.1 gw1.246.54.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_246000015 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002936884 X. tropicalis
XM_018096781 X. tropicalis
NM_001135229 X. laevis.L
IMAGE:6634763 BC168518 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XM_018232231 X. laevis.S
XM_018232230 X. laevis.S

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
PBX0148A12 AW645113 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL054e05 BJ069679 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL190e10 BJ619719 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998P209020 BX849214 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
BG409856 BG409856 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:6634763 BU909171 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6637350 BU911383 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL076k09 BJ063555 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082a11 BJ065117 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086f22 BJ066511 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088h08 BJ066862 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL053i07 BJ069536 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076k09 BJ081730 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086f22 BJ083835 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088h08 BJ084197 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL053i07 BJ086584 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054e05 BJ086797 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082a11 BJ087620 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3744259 BG016816 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage