Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (5) Nucleotides (183) Proteins (79) Interactants (6) Wiki
XB-GENEPAGE-988702

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ptbp3 - Xenopus tropicalis

RefSeq mRNAs(10)
Models - Gene (14)
Models - mRNA (30)
mRNAs (11)
ESTs (24)

RefSeq mRNAs (10)

Accession Version name Length Protein Species
XM_012956417 XM_012956417.3 polypyrimidine tract-binding protein 3 isoform X1 10928 bp XP_012811871 X. tropicalis
XM_012956427 XM_012956427.3 polypyrimidine tract-binding protein 3 isoform X2 11347 bp XP_012811881 X. tropicalis
XM_012956431 XM_012956431.3 polypyrimidine tract-binding protein 3 isoform X3 11003 bp XP_012811885 X. tropicalis
XM_012956439 XM_012956439.3 polypyrimidine tract-binding protein 3 isoform X3 11424 bp XP_012811893 X. tropicalis
XM_012956442 XM_012956442.3 polypyrimidine tract-binding protein 3 isoform X3 11352 bp XP_012811896 X. tropicalis
XM_012956445 XM_012956445.3 polypyrimidine tract-binding protein 3 isoform X3 11007 bp XP_012811899 X. tropicalis
XM_012956451 XM_012956451.3 polypyrimidine tract-binding protein 3 isoform X4 11172 bp XP_012811905 X. tropicalis
XM_012956459 XM_012956459.3 polypyrimidine tract-binding protein 3 isoform X4 11273 bp XP_012811913 X. tropicalis
NM_001127046 NM_001127046.1 polypyrimidine tract-binding protein 3 2495 bp NP_001120518 X. tropicalis
XM_031895774 XM_031895774.1 XP_031751634.1 polypyrimidine tract-binding protein 3 isoform X2 11101 bp XP_031751634 X. tropicalis

Models - Gene (14)

Source Version Model Species
NCBI 10.0 XBXT10g016939 X. tropicalis
ENSEMBL 10.0 ptbp3 X. tropicalis
Xenbase 9.1 gene23869 X. tropicalis
ENSEMBL 9.1 ptbp3 X. tropicalis
JGI 7.1 Xetro.A01974 X. tropicalis
ENSEMBL 4.1 ENSXETG00000002225 X. tropicalis
JGI 4.1 e_gw1.229.89.1 X. tropicalis
JGI 4.1 e_gw1.229.2.1 X. tropicalis
JGI 4.1 e_gw1.229.87.1 X. tropicalis
JGI 4.1 gw1.229.2.1 X. tropicalis
JGI 4.1 gw1.229.87.1 X. tropicalis
JGI 4.1 gw1.229.89.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_229000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_229000037 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA083902 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066921 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083867 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097484 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004736 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004741 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089417 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091243 X. tropicalis
Xenbase 9.1 rna47704 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091243 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089417 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070932 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066921 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083867 X. tropicalis
ENSEMBL 9.1 ENSXETT00000004736 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097484 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104201 X. tropicalis
ENSEMBL 9.1 ENSXETT00000004741 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090654 X. tropicalis
JGI 7.1 Xetro.A01974.2 X. tropicalis
JGI 7.1 Xetro.A01974.1 X. tropicalis
JGI 4.1 e_gw1.229.89.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004736 X. tropicalis
JGI 4.1 e_gw1.229.2.1 X. tropicalis
JGI 4.1 e_gw1.229.87.1 X. tropicalis
JGI 4.1 gw1.229.2.1 X. tropicalis
JGI 4.1 gw1.229.87.1 X. tropicalis
JGI 4.1 gw1.229.89.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_229000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_229000037 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7708950 BC161422 X. tropicalis NIH_XGC_tropTe5 testis frog
NM_001127046 X. tropicalis
XM_012956459 X. tropicalis
XM_012956451 X. tropicalis
XM_012956445 X. tropicalis
XM_012956442 X. tropicalis
XM_012956439 X. tropicalis
XM_012956431 X. tropicalis
XM_012956427 X. tropicalis
XM_012956417 X. tropicalis
XM_031895774 X. tropicalis

ESTs (24)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9016483 EL863670 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8906887 EL799503 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7600073 CX344855 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7716551 CX977306 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7801320 DR834854 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7708950 CX962928 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7661944 CX844012 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTbA080j24 CR443978 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas082b21 AL777078 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA047j06 BX735185 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA026p10 BX719789 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu117m01 AL791123 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9016483 EL863671 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888247 EL846474 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8906887 EL799504 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7716551 CX977305 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708950 CX962927 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7661944 CX844011 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7600073 CX344854 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA080j24 CR443979 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas082b21 BX750783 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA047j06 BX735186 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA026p10 BX719790 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu117m01 BX701792 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21