Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (11) Nucleotides (251) Proteins (39) Interactants (6) Wiki
XB-GENEPAGE-987579

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for alkbh5 - All

RefSeq mRNAs(2)
Models - Gene (27)
Models - mRNA (28)
mRNAs (6)
ESTs (150)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001008037 NM_001008037.1 RNA demethylase ALKBH5 1751 bp NP_001008038 X. tropicalis
XM_041578195 XM_041578195.1 XP_041434129.1 RNA demethylase ALKBH5 2747 bp XP_041434129 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g009137 X. tropicalis
NCBI 10.1 XBXL10_1g41417 X. laevis.L
NCBI 10.1 XBXL10_1g44046 X. laevis.S
ENSEMBL 10.0 alkbh5 X. tropicalis
JGI 9.1 Xelaev18045556m.g X. laevis.L
JGI 9.1 Xelaev18047788m.g X. laevis.S
Xenbase 9.1 gene3423 X. tropicalis
Xenbase 9.2 gene40816 X. laevis.L
Xenbase 9.2 gene49219 X. laevis.S
ENSEMBL 9.1 alkbh5 X. tropicalis
JGI 8.0 Xetrov14038850m.g X. tropicalis
JGI 7.1 Xetro.I01564 X. tropicalis
JGI 7.2 Xelaev16028378m.g X. laevis.L
JGI 6.0 XeXenL6RMv10017219m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005769 X. tropicalis
JGI 4.1 e_gw1.174.15.1 X. tropicalis
JGI 4.1 e_gw1.174.219.1 X. tropicalis
JGI 4.1 e_gw1.174.221.1 X. tropicalis
JGI 4.1 gw1.174.15.1 X. tropicalis
JGI 4.1 gw1.174.219.1 X. tropicalis
JGI 4.1 gw1.174.221.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1740013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740053 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_174000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000054 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000055 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000025 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.0 mRNA045253 X. tropicalis
NCBI 10.1 XBmRNA78150 X. laevis.L
NCBI 10.1 XBmRNA82854 X. laevis.S
ENSEMBL 10.0 ENSXETT00000112738 X. tropicalis
ENSEMBL 10.0 ENSXETT00000012702 X. tropicalis
JGI 9.1 Xelaev18045556m X. laevis.L
JGI 9.1 Xelaev18047788m X. laevis.S
Xenbase 9.1 rna11242 X. tropicalis
Xenbase 9.2 rna82982 X. laevis.L
Xenbase 9.2 rna95108 X. laevis.S
ENSEMBL 9.1 ENSXETT00000012702 X. tropicalis
JGI 8.0 Xetrov14038850m X. tropicalis
JGI 7.1 Xetro.I01564.1 X. tropicalis
JGI 7.2 Xelaev16028378m X. laevis.L
JGI 6.0 XeXenL6RMv10017219m X. laevis.L
JGI 4.1 e_gw1.174.15.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012702 X. tropicalis
JGI 4.1 e_gw1.174.219.1 X. tropicalis
JGI 4.1 e_gw1.174.221.1 X. tropicalis
JGI 4.1 gw1.174.15.1 X. tropicalis
JGI 4.1 gw1.174.219.1 X. tropicalis
JGI 4.1 gw1.174.221.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1740013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740053 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_174000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000054 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000055 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000025 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
NM_001008037 X. tropicalis
IMAGE:6978762 BC080920 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5435116 BC073226 X. laevis.L
NM_001092235 X. laevis.L
XM_018234326 X. laevis.L
XM_041578195 X. laevis.S

ESTs (150)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9017109 EL864271 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8887351 EL844690 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885581 EL842216 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8859702 EL824175 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8856593 EL819283 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8908324 EL802558 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8907354 EL801094 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8904121 EL795156 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8926062 EL672420 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8926123 EL672187 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8955920 EL661824 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8957674 EL659544 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
st49a05 DC178818 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st8m19 DC175537 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30b05 DC171986 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st81c24 DC186806 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8943153 EG655566 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
XZT13340 CX321624 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5717 CX937877 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7621550 CX342529 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610499 CX377180 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598451 CX387550 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7542858 CX458331 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568444 CX456407 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7620952 DR898450 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7739984 DN029730 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739983 DN029380 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739380 DN028469 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7721091 CX996104 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719033 CX981384 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708046 CX961550 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706383 CX958129 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7688182 CX910980 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658528 CX837582 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655250 CX825366 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7562075 CX465990 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528321 CX425028 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA021f08 CR418160 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
CN102081 CN102081 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094793 CN094793 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas103j24 AL961055 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu123j07 AL802123 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas012b20 AL634114 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu128j18 AL796381 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu082n11 AL780142 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu041i23 AL661068 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu008f15 AL642505 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6999565 CF343864 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6995615 CF239221 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6987168 CF221405 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988836 CF219986 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6978762 CF150026 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas139c10 AL972665 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:9017109 EL864272 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8887351 EL844691 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885581 EL842217 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8859702 EL824176 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8907354 EL801095 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8904121 EL795157 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8926062 EL672419 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8926123 EL672186 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst30b05 DC141681 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT13340 CX321623 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5717 CX937876 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7568444 CX456406 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7706383 CX958128 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7688182 CX910979 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658528 CX837581 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655250 CX825365 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7621550 DR898904 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620952 DR898449 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598451 DR891875 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7739984 DN029729 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739983 DN029379 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739380 DN028468 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7721091 CX996103 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719033 CX981383 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708046 CX961549 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7562075 CX465989 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7610499 CX377179 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA021f08 CR418161 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas113a07 BX762141 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139c10 BX760003 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xl225i08 DC101288 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk76m17ex DC059921 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk75a11ex DC059344 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk60l02ex DC035845 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk66n11ex DC056414 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk57i19ex DC034865 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8825391 EG587257 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8318967 DY568505 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7979828 DR730450 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982124 DR730112 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7975064 DR725638 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7981904 DR722402 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981698 DR720814 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL455j07ex BP687853 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL519b03ex BP706875 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL218l17 BJ627616 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5