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Summary Expression Phenotypes Gene Literature (2) GO Terms (1) Nucleotides (167) Proteins (67) Interactants (39) Wiki
XB-GENEPAGE-987571

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for srebf1 - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (20)
Models - mRNA (31)
mRNAs (4)
ESTs (36)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
XM_002935841 XM_002935841.5 sterol regulatory element-binding protein 1 isoform X3 4079 bp XP_002935887 X. tropicalis
XM_012971249 XM_012971249.3 sterol regulatory element-binding protein 1 isoform X2 4293 bp XP_012826703 X. tropicalis
XM_004918077 XM_004918077.4 sterol regulatory element-binding protein 1 isoform X4 5033 bp XP_004918134 X. tropicalis
XM_002935840 XM_002935840.5 sterol regulatory element-binding protein 1 isoform X1 4296 bp XP_002935886 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g010956 X. tropicalis
ENSEMBL 10.0 srebf1 X. tropicalis
Xenbase 9.1 gene4697 X. tropicalis
ENSEMBL 9.1 srebf1 X. tropicalis
JGI 7.1 Xetro.I01586 X. tropicalis
ENSEMBL 4.1 ENSXETG00000012160 X. tropicalis
JGI 4.1 e_gw1.174.203.1 X. tropicalis
JGI 4.1 e_gw1.174.114.1 X. tropicalis
JGI 4.1 e_gw1.174.265.1 X. tropicalis
JGI 4.1 gw1.174.114.1 X. tropicalis
JGI 4.1 gw1.174.203.1 X. tropicalis
JGI 4.1 gw1.174.265.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740203 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740265 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000012 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA054282 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075777 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091953 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079250 X. tropicalis
Xenbase 9.1 rna15317 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075777 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079250 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091953 X. tropicalis
ENSEMBL 9.1 ENSXETT00000026547 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101894 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089563 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084201 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077166 X. tropicalis
JGI 7.1 Xetro.I01586.2 X. tropicalis
JGI 7.1 Xetro.I01586.3 X. tropicalis
JGI 7.1 Xetro.I01586.1 X. tropicalis
JGI 4.1 e_gw1.174.203.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026547 X. tropicalis
JGI 4.1 e_gw1.174.114.1 X. tropicalis
JGI 4.1 e_gw1.174.265.1 X. tropicalis
JGI 4.1 gw1.174.114.1 X. tropicalis
JGI 4.1 gw1.174.203.1 X. tropicalis
JGI 4.1 gw1.174.265.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740203 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740265 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000012 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002935841 X. tropicalis
XM_002935840 X. tropicalis
XM_004918077 X. tropicalis
XM_012971249 X. tropicalis

ESTs (36)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8859249 EL823195 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8951415 EL662462 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
CAAO5318 CX937153 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7786196 CX327872 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595821 CX336152 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7718818 CX981559 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717663 CX979100 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7696339 CX925607 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687430 CX909309 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687376 CX909265 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687074 CX908810 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7660280 CX840593 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659424 CX839227 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655704 CX826584 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653442 CX822251 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA019d05 CR571914 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA033d20 CR431717 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA034i06 BX715841 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8859249 EL823196 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO5318 CX937152 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7696339 CX925606 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692603 CX918860 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692145 CX917600 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687074 CX908809 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7653442 CX822250 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7718818 CX981558 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717663 CX979099 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7687430 CX909308 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687376 CX909264 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7660280 CX840592 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659424 CX839226 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651965 CX814490 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7595821 CX336151 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786196 CX327871 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA033d20 CR431718 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA013f18 BX712633 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40