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Summary Expression Phenotypes Gene Literature (0) GO Terms (17) Nucleotides (155) Proteins (47) Interactants (10) Wiki
XB-GENEPAGE-986507

Show:     All X. tropicalis X. laevis

Nucleotide sequences for prkrip1 - All

RefSeq mRNAs(5)
Models - Gene (30)
Models - mRNA (31)
mRNAs (9)
ESTs (57)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001017225 NM_001017225.2 PRKR-interacting protein 1 homolog 1242 bp NP_001017225 X. tropicalis
XM_012957048 XM_012957048.3 PRKR-interacting protein 1 homolog isoform X1 1282 bp XP_012812502 X. tropicalis
XM_018091279 XM_018091279.2 PRKR-interacting protein 1 homolog isoform X1 1314 bp XP_017946768 X. tropicalis
NM_001092454 NM_001092454.1 PRKR-interacting protein 1 homolog 1188 bp NP_001085923 X. laevis.L
XM_041584711 XP_041440645.1 PRKR-interacting protein 1 homolog 1122 bp XP_041440645 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g6702 X. laevis.L
NCBI 10.0 XBXT10g015431 X. tropicalis
NCBI 10.1 XBXL10_1g9456 X. laevis.S
ENSEMBL 10.0 prkrip1 X. tropicalis
Xenbase 9.2 gene16873 X. laevis.L
JGI 9.1 Xelaev18011909m.g X. laevis.L
Xenbase 9.1 gene7400 X. tropicalis
ENSEMBL 9.1 prkrip1 X. tropicalis
JGI 8.0 Xetrov14007243m.g X. tropicalis
JGI 7.2 Xelaev16003351m.g X. laevis.L
JGI 7.1 Xetro.B00732 X. tropicalis
JGI 6.0 XeXenL6RMv10014363m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024610 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_142000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_142000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_142000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_142000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_142000008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_142000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1420008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1420023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1420022 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1420005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1420085 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1420016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1420012 X. tropicalis
JGI 4.1 e_gw1.142.85.1 X. tropicalis
JGI 4.1 gw1.142.85.1 X. tropicalis
JGI 4.1 gw1.142.16.1 X. tropicalis
JGI 4.1 e_gw1.142.16.1 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA12561 X. laevis.L
NCBI 10.1 XBmRNA17633 X. laevis.S
NCBI 10.0 mRNA076348 X. tropicalis
ENSEMBL 10.0 ENSXETT00000053056 X. tropicalis
Xenbase 9.2 rna49309 X. laevis.L
ENSEMBL 9.1 ENSXETT00000053056 X. tropicalis
Xenbase 9.1 rna23880 X. tropicalis
JGI 9.1 Xelaev18011909m X. laevis.L
JGI 8.0 Xetrov14007243m X. tropicalis
JGI 7.2 Xelaev16003351m X. laevis.L
JGI 7.1 Xetro.B00732.2 X. tropicalis
JGI 7.1 Xetro.B00732.1 X. tropicalis
JGI 6.0 XeXenL6RMv10014363m X. laevis.L
JGI 4.1 e_gw1.142.16.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_142000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_142000003 X. tropicalis
JGI 4.1 gw1.142.16.1 X. tropicalis
JGI 4.1 gw1.142.85.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_142000008 X. tropicalis
JGI 4.1 e_gw1.142.85.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053056 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1420005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1420022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1420023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1420008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1420012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1420016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1420085 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_142000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_142000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_142000023 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7789451 BC159011 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605214 BC161583 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu032k09 CR760297 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001017225 X. tropicalis
XM_012957048 X. tropicalis
XM_018091279 X. tropicalis
IMAGE:5506186 BC073544 X. laevis.L
NM_001092454 X. laevis.L
XM_041584711 X. laevis.S

ESTs (57)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu032k09 AL655781 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046n15 AL658913 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas034j21 AL649258 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141g17 AL957736 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142d13 AL971840 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA020a16 BX712184 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA007h13 CR410334 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7567283 CX507449 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557548 CX506372 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st50d12 DC179092 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st74k17 DC185132 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7569489 CX458004 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521502 CX469969 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553802 CX492213 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu087j06 AL805228 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7712649 CX970238 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7789451 CX335031 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas002c14 AL595102 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas012i04 AL634065 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7569489 CX458003 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst74k17 DC154989 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7521502 CX469968 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA020a16 BX712185 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7553802 CX492212 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7712649 CX970237 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7557548 CX506371 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas142d13 BX757879 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141e19 BX764945 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6931090 CB941176 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3301361 BE132283 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL040o05 BJ037558 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL042c22 BJ037996 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl226p18 DC101752 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl226p24 DC101756 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl307e19 DC125244 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl321j14 DC129475 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl321j24 DC129483 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL413g24ex BP673321 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL469p02ex BP692896 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL510p02ex BP704175 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL492l02ex BP707852 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk124k10ex DC043512 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk62n15ex DC055137 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6873162 CB198213 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XENOPUS_SOURCE_ID:xlnoc001a22 AW147295 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxlk124k10ex DC010397 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk62n15ex DC021734 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4083427 BG022833 3' X. laevis.L Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
XENOPUS_SOURCE_ID:xlnoc001a22 AW147962 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl321j24 DC093711 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl321j14 DC093706 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl307e19 DC090300 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl226p24 DC067739 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl226p18 DC067734 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL042c22 BJ052651 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL469p02ex BP727174 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL510p02ex BP737012 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5