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Summary Expression Phenotypes Gene Literature (15) GO Terms (16) Nucleotides (115) Proteins (28) Interactants (48) Wiki
XB-GENEPAGE-985439

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cir1 - All

RefSeq mRNAs(2)
Models - Gene (18)
Models - mRNA (19)
mRNAs (4)
ESTs (46)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
XM_002934604 XM_002934604.5 corepressor interacting with RBPJ 1 1409 bp XP_002934650 X. tropicalis
XM_018235923 XM_018235923.2 corepressor interacting with RBPJ 1 1823 bp XP_018091412 X. laevis.L

Models - Gene (18)

Source Version Model Species
NCBI 10.1 XBXL10_1g40710 X. laevis.L
NCBI 10.0 XBXT10g016879 X. tropicalis
ENSEMBL 10.0 cir1 X. tropicalis
Xenbase 9.2 gene1873 X. laevis.L
JGI 9.1 Xelaev18044715m.g X. laevis.L
Xenbase 9.1 gene30226 X. tropicalis
ENSEMBL 9.1 cir1 X. tropicalis
JGI 7.2 Xelaev16053419m.g X. laevis.L
JGI 7.1 Xetro.I00347 X. tropicalis
JGI 6.0 XeXenL6RMv10007319m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008492 X. tropicalis
JGI 4.1 e_gw1.105.153.1 X. tropicalis
JGI 4.1 gw1.105.215.1 X. tropicalis
JGI 4.1 e_gw1.105.15.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_105000019 X. tropicalis
JGI 4.1 gw1.105.153.1 X. tropicalis
JGI 4.1 gw1.105.15.1 X. tropicalis
JGI 4.1 e_gw1.105.215.1 X. tropicalis

mRNAs based on gene models(19)

Source Version Model Species
NCBI 10.1 XBmRNA76654 X. laevis.L
NCBI 10.0 mRNA083623 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105463 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086342 X. tropicalis
Xenbase 9.2 rna5471 X. laevis.L
JGI 9.1 Xelaev18044715m X. laevis.L
Xenbase 9.1 rna57912 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086342 X. tropicalis
JGI 7.2 Xelaev16053419m X. laevis.L
JGI 7.1 Xetro.I00347.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007319m X. laevis.L
JGI 4.1 gw1.105.153.1 X. tropicalis
JGI 4.1 e_gw1.105.153.1 X. tropicalis
JGI 4.1 e_gw1.105.215.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000018588 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_105000019 X. tropicalis
JGI 4.1 gw1.105.15.1 X. tropicalis
JGI 4.1 e_gw1.105.15.1 X. tropicalis
JGI 4.1 gw1.105.215.1 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002934604 X. tropicalis
IMAGE:7019989 BC081191 X. laevis.L
IMAGE:3751423 BC097704 X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XM_018235923 X. laevis.L

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7644023 CX799727 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7550514 CX509810 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530133 CX419336 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr29A07 CN106139 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
st16a18 DC167401 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu009k03 AL634838 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu048n10 AL659796 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas135n14 AL958144 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas083i06 AL964155 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139b10 AL972945 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xtbs24I20 CN084625 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7734670 DN019812 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7703224 CX939095 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas139b10 BX759987 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst15a18 DC137031 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst16a18 DC137338 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7644023 CX799726 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7703224 CX939094 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7734670 DN019811 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
xtbs24I20 CN084624 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xl330d18 DC132117 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL453k13ex BP687246 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL461k22ex BP690491 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL466p21ex BP691978 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488h11ex BP699696 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk8c15ex DC061962 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4201750 BG234813 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
xl263j17 DC112831 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3742729 BE679597 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
xl235m01 DC104396 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0137G05 AW644222 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3751423 BG345738 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL159f20 BJ612487 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL451l16ex BP686601 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk120i15ex DC042156 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk146e13ex DC050537 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk72j12ex DC058565 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL451l16ex BP722336 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL461k22ex BP725072 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL466p21ex BP726359 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488h11ex BP732574 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk120i15ex DC009146 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk8c15ex DC028435 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl235m01 DC070182 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4201750 BG161022 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3751423 BG023368 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5