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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (131) Proteins (44) Interactants (8) Wiki
XB-GENEPAGE-985088

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for kdsr - All

RefSeq mRNAs(2)
Models - Gene (19)
Models - mRNA (29)
mRNAs (7)
ESTs (40)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001079254 NM_001079254.1 3-ketodihydrosphingosine reductase precursor 5239 bp NP_001072722 X. tropicalis
NM_001091235 NM_001091235.1 3-ketodihydrosphingosine reductase L homeolog precursor 1938 bp NP_001084704 X. laevis.L

Models - Gene (19)

Source Version Model Species
NCBI 10.0 XBXT10g002946 X. tropicalis
NCBI 10.1 XBXL10_1g27551 X. laevis.L
ENSEMBL 10.0 kdsr X. tropicalis
JGI 9.1 Xelaev18031550m.g X. laevis.L
Xenbase 9.1 gene31921 X. tropicalis
Xenbase 9.2 gene8625 X. laevis.L
ENSEMBL 9.1 pcdh18 X. tropicalis
JGI 8.0 Xetrov14026825m.g X. tropicalis
JGI 7.1 Xetro.F00867 X. tropicalis
JGI 7.2 Xelaev16066954m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036907m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024121 X. tropicalis
JGI 4.1 e_gw1.95.119.1 X. tropicalis
JGI 4.1 e_gw1.95.148.1 X. tropicalis
JGI 4.1 e_gw1.95.170.1 X. tropicalis
JGI 4.1 gw1.95.119.1 X. tropicalis
JGI 4.1 gw1.95.148.1 X. tropicalis
JGI 4.1 gw1.95.170.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_95000040 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA014966 X. tropicalis
NCBI 10.1 XBmRNA51686 X. laevis.L
ENSEMBL 10.0 ENSXETT00000087065 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115188 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084947 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092189 X. tropicalis
ENSEMBL 10.0 ENSXETT00000111024 X. tropicalis
JGI 9.1 Xelaev18031550m X. laevis.L
Xenbase 9.1 rna60520 X. tropicalis
Xenbase 9.2 rna25113 X. laevis.L
ENSEMBL 9.1 ENSXETT00000052055 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087065 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084947 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092189 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078124 X. tropicalis
JGI 8.0 Xetrov14026825m X. tropicalis
JGI 7.1 Xetro.F00867.2 X. tropicalis
JGI 7.1 Xetro.F00867.3 X. tropicalis
JGI 7.1 Xetro.F00867.1 X. tropicalis
JGI 7.2 Xelaev16066954m X. laevis.L
JGI 6.0 XeXenL6RMv10036907m X. laevis.L
JGI 4.1 e_gw1.95.170.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052055 X. tropicalis
JGI 4.1 e_gw1.95.119.1 X. tropicalis
JGI 4.1 e_gw1.95.148.1 X. tropicalis
JGI 4.1 gw1.95.119.1 X. tropicalis
JGI 4.1 gw1.95.148.1 X. tropicalis
JGI 4.1 gw1.95.170.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_95000040 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
NM_001079254 X. tropicalis
IMAGE:7683764 BC125689 X. tropicalis
TEgg083d03 CT030271 X. tropicalis
IMAGE:6316222 BC068662 X. laevis.L
NM_001091235 X. laevis.L
XM_018266413 X. laevis.L
XM_018266412 X. laevis.L

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8925638 EL671781 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8940628 EL645230 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st103d08 DC191309 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7594028 CX331024 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7755853 DN058070 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7752614 DN053264 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7654566 CX824545 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TGas022j24 AL628855 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu123l19 AL802137 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu053c10 AL674412 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8925638 EL671780 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8923809 EL665668 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8940628 EL645229 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst103d08 DC161343 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7654566 CX824544 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7755853 DN058069 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7752614 DN053263 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
xthr17B24 CN100454 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA017d19 BX731385 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA074p03 BX717240 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xl272l15 DC115512 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk126c19ex DC044005 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL007a14 BJ031390 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL209f01 BJ624698 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206f21 BJ623875 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL153j04 BJ096334 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5536752 CF288317 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6878140 CB180142 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6326626 CA974131 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3548366 BF613618 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
BE025963 BE025963 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0166H04 AW646712 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl272l15 DC080588 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk126c19ex DC010868 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL209f01 BJ641210 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206f21 BJ640472 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL153j04 BJ100564 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL155i11 BJ099918 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL007a14 BJ046327 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6878140 CB560895 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage