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XB-GENEPAGE-984984
Nucleotide sequences for col5a3 - All
RefSeq mRNAs(12) |
Models - Gene (22) |
Models - mRNA (33) |
mRNAs (13) |
ESTs (211) |
RefSeq mRNAs (12)
Accession | Version | Protein Name | Length | Protein | Species |
XM_031901022 | XM_031901022.1 | XP_031756882.1 collagen alpha-1(XI) chain isoform X1 | 7666 bp | XP_031756882 | X. tropicalis |
XM_031901023 | XM_031901023.1 | XP_031756883.1 collagen alpha-1(XI) chain isoform X3 | 7341 bp | XP_031756883 | X. tropicalis |
XM_031901024 | XM_031901024.1 | XP_031756884.1 collagen alpha-1(XI) chain isoform X5 | 7184 bp | XP_031756884 | X. tropicalis |
XM_031901025 | XM_031901025.1 | XP_031756885.1 collagen alpha-1(XI) chain isoform X6 | 7158 bp | XP_031756885 | X. tropicalis |
XM_031901026 | XM_031901026.1 | XP_031756886.1 collagen alpha-1(XI) chain isoform X7 | 6796 bp | XP_031756886 | X. tropicalis |
XM_004913713 | XM_004913713.3 | collagen alpha-1(XI) chain isoform X2 | 7452 bp | XP_004913770 | X. tropicalis |
XM_004913714 | XM_004913714.4 | collagen alpha-1(XI) chain isoform X4 | 7300 bp | XP_004913771 | X. tropicalis |
XM_018253662 | XM_018253662.2 | collagen alpha-1(XI) chain isoform X1 | 14596 bp | XP_018109151 | X. laevis.L |
XM_018253663 | XM_018253663.2 | collagen alpha-1(XI) chain isoform X3 | 14409 bp | XP_018109152 | X. laevis.L |
XM_018256276 | XM_018256276.2 | collagen alpha-1(XI) chain isoform X1 | 5829 bp | XP_018111765 | X. laevis.S |
XM_018256277 | XM_018256277.2 | collagen alpha-1(XI) chain isoform X2 | 5643 bp | XP_018111766 | X. laevis.S |
XM_041587221 | XM_041587221.1 | XP_041443155.1 collagen alpha-1(XI) chain isoform X2 | 14332 bp | XP_041443155 | X. laevis.L |
Models - Gene (22)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g004184 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g17017 | X. laevis.S |
NCBI | 10.1 | XBXL10_1g14121 | X. laevis.L |
ENSEMBL | 10.0 | col5a3 | X. tropicalis |
Xenbase | 9.1 | gene21451 | X. tropicalis |
Xenbase | 9.2 | gene48858 | X. laevis.S |
Xenbase | 9.2 | gene7731 | X. laevis.L |
ENSEMBL | 9.1 | col5a3 | X. tropicalis |
JGI | 7.1 | Xetro.K00089 | X. tropicalis |
JGI | 4.1 | e_gw1.92.14.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.15.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.230.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.83.1 | X. tropicalis |
JGI | 4.1 | gw1.92.14.1 | X. tropicalis |
JGI | 4.1 | gw1.92.15.1 | X. tropicalis |
JGI | 4.1 | gw1.92.230.1 | X. tropicalis |
JGI | 4.1 | gw1.92.83.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_920009 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_920083 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_920230 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_920020 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_92000021 | X. tropicalis |
mRNAs based on gene models(33)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA020934 | X. tropicalis |
NCBI | 10.1 | XBmRNA26648 | X. laevis.L |
NCBI | 10.1 | XBmRNA31613 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000099831 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000101512 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000082392 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000027846 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000096866 | X. tropicalis |
Xenbase | 9.2 | rna22583 | X. laevis.L |
Xenbase | 9.2 | rna94622 | X. laevis.S |
Xenbase | 9.1 | rna43863 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000096866 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000099831 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000101512 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000082392 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000027846 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000099252 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000071373 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000023717 | X. tropicalis |
JGI | 7.1 | Xetro.K00089.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.83.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.14.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.15.1 | X. tropicalis |
JGI | 4.1 | e_gw1.92.230.1 | X. tropicalis |
JGI | 4.1 | gw1.92.14.1 | X. tropicalis |
JGI | 4.1 | gw1.92.15.1 | X. tropicalis |
JGI | 4.1 | gw1.92.230.1 | X. tropicalis |
JGI | 4.1 | gw1.92.83.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_920009 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_920083 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_920230 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_920020 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_92000021 | X. tropicalis |
mRNAs from cDNA libraries (13)
Clone | Accession | Species | Library | Anatomy | Stage |
TTpA004p20 | CR848238 | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
XM_004913714 | X. tropicalis | ||||
XM_004913713 | X. tropicalis | ||||
XM_031901026 | X. tropicalis | ||||
XM_031901025 | X. tropicalis | ||||
XM_031901024 | X. tropicalis | ||||
XM_031901023 | X. tropicalis | ||||
XM_031901022 | X. tropicalis | ||||
XM_018256277 | X. laevis.S | ||||
XM_018256276 | X. laevis.S | ||||
XM_018253663 | X. laevis.L | ||||
XM_018253662 | X. laevis.L | ||||
XM_041587221 | X. laevis.L |