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Summary Expression Phenotypes Gene Literature (6) GO Terms (6) Nucleotides (81) Proteins (45) Interactants (35) Wiki
XB-GENEPAGE-983566

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for opn8 - All

RefSeq mRNAs(1)
Models - Gene (30)
Models - mRNA (30)
mRNAs (6)
ESTs (5)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
MN820854 MN820854.1 QPJ58122.1 opn8, partial 916 bp QPJ58122 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g001022 X. tropicalis
NCBI 10.1 XBXL10_1g24509 X. laevis.L
NCBI 10.1 XBXL10_1g26258 X. laevis.S
ENSEMBL 10.0 opn8 X. tropicalis
JGI 9.1 Xelaev18028176m.g X. laevis.L
JGI 9.1 Xelaev18030168m.g X. laevis.S
Xenbase 9.1 gene17073 X. tropicalis
Xenbase 9.2 gene318 X. laevis.L
Xenbase 9.2 gene41337 X. laevis.S
ENSEMBL 9.1 opn5.2 X. tropicalis
JGI 7.1 Xetro.K05157 X. tropicalis
JGI 6.0 XeXenL6RMv10003793m.g X. laevis.L
JGI 4.1 e_gw1.63.218.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_630004 X. tropicalis
JGI 4.1 e_gw1.63.225.1 X. tropicalis
JGI 4.1 e_gw1.63.227.1 X. tropicalis
JGI 4.1 e_gw1.63.289.1 X. tropicalis
JGI 4.1 e_gw1.63.290.1 X. tropicalis
JGI 4.1 e_gw1.63.291.1 X. tropicalis
JGI 4.1 e_gw1.63.292.1 X. tropicalis
JGI 4.1 gw1.63.218.1 X. tropicalis
JGI 4.1 gw1.63.225.1 X. tropicalis
JGI 4.1 gw1.63.227.1 X. tropicalis
JGI 4.1 gw1.63.289.1 X. tropicalis
JGI 4.1 gw1.63.290.1 X. tropicalis
JGI 4.1 gw1.63.291.1 X. tropicalis
JGI 4.1 gw1.63.292.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630218 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000005 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA005122 X. tropicalis
NCBI 10.1 XBmRNA45846 X. laevis.L
NCBI 10.1 XBmRNA49085 X. laevis.S
ENSEMBL 10.0 ENSXETT00000061629 X. tropicalis
JGI 9.1 Xelaev18028176m X. laevis.L
JGI 9.1 Xelaev18030168m X. laevis.S
Xenbase 9.1 rna37034 X. tropicalis
Xenbase 9.2 rna912 X. laevis.L
Xenbase 9.2 rna83738 X. laevis.S
ENSEMBL 9.1 ENSXETT00000061629 X. tropicalis
JGI 7.1 Xetro.K05157.1 X. tropicalis
JGI 6.0 XeXenL6RMv10003793m X. laevis.L
JGI 4.1 e_gw1.63.218.1 X. tropicalis
JGI 4.1 e_gw1.63.225.1 X. tropicalis
JGI 4.1 e_gw1.63.227.1 X. tropicalis
JGI 4.1 e_gw1.63.289.1 X. tropicalis
JGI 4.1 e_gw1.63.290.1 X. tropicalis
JGI 4.1 e_gw1.63.291.1 X. tropicalis
JGI 4.1 e_gw1.63.292.1 X. tropicalis
JGI 4.1 gw1.63.218.1 X. tropicalis
JGI 4.1 gw1.63.225.1 X. tropicalis
JGI 4.1 gw1.63.227.1 X. tropicalis
JGI 4.1 gw1.63.289.1 X. tropicalis
JGI 4.1 gw1.63.290.1 X. tropicalis
JGI 4.1 gw1.63.291.1 X. tropicalis
JGI 4.1 gw1.63.292.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_630004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_630218 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_630005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_63000005 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_004914949 X. tropicalis
XM_004914948 X. tropicalis
XM_031903020 X. tropicalis
XM_018266001 X. laevis.S
XM_018264081 X. laevis.L
MN820854 X. laevis.L

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7558007 CX496830 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5381830 BQ527626 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7558007 CX496829 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5381830 BQ527625 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5537068 BQ731650 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32