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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (107) Proteins (43) Interactants (15) Wiki
XB-GENEPAGE-980086

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for synj2 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (18)
Models - mRNA (29)
mRNAs (3)
ESTs (16)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001142039 NM_001142039.1 synaptojanin-2 5443 bp NP_001135511 X. tropicalis
XM_031901559 XM_031901559.1 XP_031757419.1 synaptojanin-2 isoform X1 4724 bp XP_031757419 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g003585 X. tropicalis
ENSEMBL 10.0 synj2 X. tropicalis
Xenbase 9.1 gene21734 X. tropicalis
ENSEMBL 9.1 scarb1 X. tropicalis
JGI 7.1 Xetro.E01010 X. tropicalis
JGI 4.1 e_gw1.2.570.1 X. tropicalis
JGI 4.1 e_gw1.2.569.1 X. tropicalis
JGI 4.1 e_gw1.2.573.1 X. tropicalis
JGI 4.1 gw1.2.569.1 X. tropicalis
JGI 4.1 gw1.2.570.1 X. tropicalis
JGI 4.1 gw1.2.573.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20569 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20570 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20573 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20127 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000129 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000130 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA018137 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070406 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021808 X. tropicalis
Xenbase 9.1 rna44367 X. tropicalis
ENSEMBL 9.1 ENSXETT00000021808 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070406 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085579 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086810 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102625 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105130 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077202 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085735 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103512 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079581 X. tropicalis
JGI 7.1 Xetro.E01010.2 X. tropicalis
JGI 7.1 Xetro.E01010.1 X. tropicalis
JGI 4.1 e_gw1.2.570.1 X. tropicalis
JGI 4.1 e_gw1.2.569.1 X. tropicalis
JGI 4.1 e_gw1.2.573.1 X. tropicalis
JGI 4.1 gw1.2.569.1 X. tropicalis
JGI 4.1 gw1.2.570.1 X. tropicalis
JGI 4.1 gw1.2.573.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_20063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20569 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20570 X. tropicalis
JGI 4.1 estExt_Genewise1.C_20573 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_20127 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000129 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_2000130 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
IMAGE:7785225 BC167930 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001142039 X. tropicalis
XM_031901559 X. tropicalis

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9008506 EL837615 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8921885 EL835870 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8867207 EL705939 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7785225 CX316138 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7563786 CX473842 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7693173 CX919886 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7522427 CX471062 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA005l09 BX707342 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9008506 EL837616 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8921885 EL835871 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8867207 EL705938 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7693173 CX919885 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7563786 CX473841 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522427 CX471061 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7785225 CX316137 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA005l09 BX707343 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40