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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (136) Proteins (81) Interactants (18) Wiki
XB-GENEPAGE-979368

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for fat3 - All

RefSeq mRNAs(10)
Models - Gene (33)
Models - mRNA (50)
mRNAs (18)
ESTs (16)

RefSeq mRNAs (10)

Accession Version name Length Protein Species
XM_018247785 protocadherin Fat 3-like isoform X4 15478 bp XP_018103274 X. laevis.L
XM_018247788 protocadherin Fat 3-like isoform X6 15383 bp XP_018103277 X. laevis.L
XM_041582698 XP_041438632.1 protocadherin Fat 3-like isoform X1 15550 bp XP_041438632 X. laevis.L
XM_041582699 XP_041438633.1 protocadherin Fat 3-like isoform X1 15543 bp XP_041438633 X. laevis.L
XM_041582700 XP_041438634.1 protocadherin Fat 3-like isoform X2 15514 bp XP_041438634 X. laevis.L
XM_041582701 XP_041438635.1 protocadherin Fat 3-like isoform X3 15493 bp XP_041438635 X. laevis.L
XM_041582702 XP_041438636.1 protocadherin Fat 3-like isoform X5 15455 bp XP_041438636 X. laevis.L
XM_041584585 XP_041440519.1 protocadherin Fat 3 isoform X1 15710 bp XP_041440519 X. laevis.S
XM_041584586 XP_041440520.1 protocadherin Fat 3 isoform X2 15649 bp XP_041440520 X. laevis.S
XM_041584587 XP_041440521.1 protocadherin Fat 3 isoform X4 15612 bp XP_041440521 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g002888 X. tropicalis
NCBI 10.1 XBXL10_1g11102 X. laevis.S
NCBI 10.1 XBXL10_1g8526 X. laevis.L
ENSEMBL 10.0 fat3 X. tropicalis
JGI 9.1 Xelaev18016333m.g X. laevis.S
Xenbase 9.1 gene28561 X. tropicalis
Xenbase 9.2 gene35010 X. laevis.S
ENSEMBL 9.1 fat3 X. tropicalis
JGI 7.1 Xetro.B02068 X. tropicalis
JGI 6.0 XeXenL6RMv10006070m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000017133 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5700002 X. tropicalis
JGI 4.1 e_gw1.570.25.1 X. tropicalis
JGI 4.1 e_gw1.570.47.1 X. tropicalis
JGI 4.1 e_gw1.570.52.1 X. tropicalis
JGI 4.1 e_gw1.570.53.1 X. tropicalis
JGI 4.1 e_gw1.570.54.1 X. tropicalis
JGI 4.1 e_gw1.570.55.1 X. tropicalis
JGI 4.1 e_gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.25.1 X. tropicalis
JGI 4.1 gw1.570.52.1 X. tropicalis
JGI 4.1 gw1.570.53.1 X. tropicalis
JGI 4.1 gw1.570.55.1 X. tropicalis
JGI 4.1 gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.47.1 X. tropicalis
JGI 4.1 gw1.570.54.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5700012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700052 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5700016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_570000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_570000002 X. tropicalis

mRNAs based on gene models(50)

Source Version Model Species
NCBI 10.0 mRNA014660 X. tropicalis
NCBI 10.1 XBmRNA16120 X. laevis.L
NCBI 10.1 XBmRNA20867 X. laevis.S
ENSEMBL 10.0 ENSXETT00000083957 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094566 X. tropicalis
ENSEMBL 10.0 ENSXETT00000037343 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073431 X. tropicalis
JGI 9.1 Xelaev18016333m X. laevis.S
Xenbase 9.1 rna55267 X. tropicalis
Xenbase 9.2 rna74769 X. laevis.S
ENSEMBL 9.1 ENSXETT00000072175 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100661 X. tropicalis
ENSEMBL 9.1 ENSXETT00000037343 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088700 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073431 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094566 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083957 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074901 X. tropicalis
JGI 7.1 Xetro.B02068.2 X. tropicalis
JGI 7.1 Xetro.B02068.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006070m X. laevis.S
JGI 4.1 estExt_fgenesh1_pm.C_5700002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037345 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037341 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037342 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037343 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037346 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037348 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037349 X. tropicalis
JGI 4.1 e_gw1.570.25.1 X. tropicalis
JGI 4.1 e_gw1.570.47.1 X. tropicalis
JGI 4.1 e_gw1.570.52.1 X. tropicalis
JGI 4.1 e_gw1.570.53.1 X. tropicalis
JGI 4.1 e_gw1.570.54.1 X. tropicalis
JGI 4.1 e_gw1.570.55.1 X. tropicalis
JGI 4.1 e_gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.25.1 X. tropicalis
JGI 4.1 gw1.570.52.1 X. tropicalis
JGI 4.1 gw1.570.53.1 X. tropicalis
JGI 4.1 gw1.570.55.1 X. tropicalis
JGI 4.1 gw1.570.70.1 X. tropicalis
JGI 4.1 gw1.570.47.1 X. tropicalis
JGI 4.1 gw1.570.54.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5700012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5700052 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5700016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_570000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_570000002 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
XM_031897344 X. tropicalis
XM_031897343 X. tropicalis
XM_031897342 X. tropicalis
XM_031897341 X. tropicalis
XM_031897340 X. tropicalis
XM_031897339 X. tropicalis
XM_018250358 X. laevis.S
XM_018250357 X. laevis.S
XM_041584587 X. laevis.S
XM_041584586 X. laevis.S
XM_041584585 X. laevis.S
XM_041582702 X. laevis.L
XM_041582701 X. laevis.L
XM_041582700 X. laevis.L
XM_041582699 X. laevis.L
XM_041582698 X. laevis.L
XM_018247788 X. laevis.L
XM_018247785 X. laevis.L

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8956557 EL660736 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
CAAN12049 CX928418 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7656323 CX826923 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650789 CX811968 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650161 CX810621 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649929 CX810003 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648145 CX807225 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648269 CX807091 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642944 CX797850 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5382772 BQ394201 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
CAAN12049 CX928417 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7656323 CX826922 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650789 CX811967 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650161 CX810620 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642944 CX797849 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5382772 BQ394200 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19