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Summary Expression Phenotypes Gene Literature (0) GO Terms (18) Nucleotides (187) Proteins (55) Interactants (30) Wiki
XB-GENEPAGE-978322

Show:     All X. tropicalis X. laevis

Nucleotide sequences for apip - All

RefSeq mRNAs(4)
Models - Gene (34)
Models - mRNA (40)
mRNAs (7)
ESTs (84)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001015712 NM_001015712.1 methylthioribulose-1-phosphate dehydratase 1717 bp NP_001015712 X. tropicalis
NM_001091207 NM_001091207.1 methylthioribulose-1-phosphate dehydratase 3431 bp NP_001084676 X. laevis.S
XM_018259550 XM_018259550.2 methylthioribulose-1-phosphate dehydratase isoform X1 1754 bp XP_018115039 X. laevis.S
XM_018257327 XM_018257327.2 methylthioribulose-1-phosphate dehydratase 1799 bp XP_018112816 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g20952 X. laevis.S
NCBI 10.1 XBXL10_1g17734 X. laevis.L
NCBI 10.0 XBXT10g018479 X. tropicalis
ENSEMBL 10.0 apip X. tropicalis
Xenbase 9.2 gene1363 X. laevis.S
Xenbase 9.2 gene12504 X. laevis.L
JGI 9.1 Xelaev18024501m.g X. laevis.S
JGI 9.1 Xelaev18021847m.g X. laevis.L
Xenbase 9.1 gene356 X. tropicalis
ENSEMBL 9.1 apip X. tropicalis
JGI 8.0 Xetrov14016446m.g X. tropicalis
JGI 7.2 Xelaev16053768m.g X. laevis.S
JGI 7.1 Xetro.D00110 X. tropicalis
JGI 6.0 XeXenL6RMv10005171m.g X. laevis.S
JGI 6.0 XeXenL6RMv10039029m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000007558 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000053 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000054 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_281000018 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_281000013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2810054 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2810053 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2810013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810205 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810169 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810079 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2810040 X. tropicalis
JGI 4.1 gw1.281.79.1 X. tropicalis
JGI 4.1 gw1.281.205.1 X. tropicalis
JGI 4.1 gw1.281.169.1 X. tropicalis
JGI 4.1 e_gw1.281.79.1 X. tropicalis
JGI 4.1 e_gw1.281.205.1 X. tropicalis
JGI 4.1 e_gw1.281.169.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2810018 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA38754 X. laevis.S
NCBI 10.1 XBmRNA32677 X. laevis.L
ENSEMBL 10.0 ENSXETT00000016462 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087999 X. tropicalis
NCBI 10.0 mRNA091226 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072799 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072378 X. tropicalis
Xenbase 9.2 rna3984 X. laevis.S
Xenbase 9.2 rna36369 X. laevis.L
ENSEMBL 9.1 ENSXETT00000072799 X. tropicalis
ENSEMBL 9.1 ENSXETT00000016462 X. tropicalis
Xenbase 9.1 rna1117 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072378 X. tropicalis
JGI 9.1 Xelaev18021847m X. laevis.L
JGI 9.1 Xelaev18024501m X. laevis.S
ENSEMBL 9.1 ENSXETT00000087999 X. tropicalis
JGI 8.0 Xetrov14016446m X. tropicalis
JGI 7.2 Xelaev16053768m X. laevis.S
JGI 7.1 Xetro.D00110.1 X. tropicalis
JGI 6.0 XeXenL6RMv10039029m X. laevis.S
JGI 6.0 XeXenL6RMv10005171m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_281000013 X. tropicalis
JGI 4.1 e_gw1.281.205.1 X. tropicalis
JGI 4.1 e_gw1.281.79.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016462 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2810013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2810053 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2810054 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2810018 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2810040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810079 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810169 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810205 X. tropicalis
JGI 4.1 e_gw1.281.169.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000053 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000054 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_281000018 X. tropicalis
JGI 4.1 gw1.281.169.1 X. tropicalis
JGI 4.1 gw1.281.205.1 X. tropicalis
JGI 4.1 gw1.281.79.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7021702 BC089643 X. tropicalis
TTpA004g08 CT030583 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
NM_001015712 X. tropicalis
IMAGE:6632122 BC068773 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091207 X. laevis.S
XM_018259550 X. laevis.S
XM_018257327 X. laevis.L

ESTs (84)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA042a03 CR579107 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:5383567 BQ395926 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7667749 CX854524 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7664526 CX849487 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7658408 CX837752 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:6982660 CF151059 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7621138 DR898724 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA004g08 BX706603 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA048f09 BX727116 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas079h21 AL774798 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas129l22 AL961678 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7601445 CX364416 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623365 CX372382 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7583893 CX414485 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas095h21 AL962476 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas118a06 AL973144 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6987464 CF221150 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7028516 CF781306 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7713119 CX970857 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7698161 CX929878 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698237 CX929739 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN10973 CX926423 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694038 CX921667 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687622 CX910018 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu131h24 AL803603 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7538480 CX450524 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu087p14 AL805265 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7563604 CX473907 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr10L05 CN095903 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7565285 CX481549 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA080b24 CR447166 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA014d10 CR566498 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs25D22 CN085499 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
THdA035l12 CR569946 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs19L11 CN081532 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7698237 CX929738 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu087p14 BX696428 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu131h24 BX697686 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5383567 BQ395925 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas095h21 BX751419 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079h21 BX751896 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7538480 CX450523 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563604 CX473906 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565285 CX481548 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA014d10 CR566499 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA035l12 CR569947 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA042a03 CR579108 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7621138 CX341854 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601445 CX364415 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6982660 CF242504 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7658408 CX837751 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7667749 CX854523 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7687622 CX910017 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694038 CX921666 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN10973 CX926422 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7698161 CX929877 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7713119 CX970856 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
xtbs25D22 CN085498 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr10L05 CN095902 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:4684070 BQ733451 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0042F09 AW636090 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL054i10 BJ069772 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4959925 BM192538 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8542908 EB479561 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL220p07 BJ628237 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6931934 CB941751 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL214m13 BJ626403 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6931871 CB942497 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
XL172h09 BJ615537 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6632122 BU907032 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6935958 CB984107 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
PBX0103C09 AW641185 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6935958 CD811171 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
PBX0095G05 AW640493 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5514815 CF290743 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998M1410929 BX854038 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL064f06 BJ059933 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074m22 BJ062036 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL220p07 BJ644487 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL214m13 BJ642795 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8542908 EE297405 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL172h09 BJ632161 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4959925 BM192862 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8542908 EE297404 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62